Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh6P54276 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh6P54276 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh6P54276 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Msh6P54276 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh6P54276 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Msh6P54276 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Msh6P54276 Gm7789-202ENSMUST00000211273 1400 ntBASIC16.3■□□□□ 0.2
Msh6P54276 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Msh6P54276 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh6P54276 Gm3287-205ENSMUST00000228893 1332 ntBASIC16.3■□□□□ 0.2
Msh6P54276 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Msh6P54276 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC16.3■□□□□ 0.2
Msh6P54276 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
Msh6P54276 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Msh6P54276 Gm13996-201ENSMUST00000118456 430 ntBASIC16.3■□□□□ 0.2
Msh6P54276 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC16.3■□□□□ 0.2
Msh6P54276 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC16.3■□□□□ 0.2
Msh6P54276 Gm13813-201ENSMUST00000120998 787 ntBASIC16.3■□□□□ 0.2
Msh6P54276 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC16.3■□□□□ 0.2
Msh6P54276 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Msh6P54276 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Msh6P54276 Gm27023-201ENSMUST00000182372 285 ntBASIC16.3■□□□□ 0.2
Msh6P54276 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Msh6P54276 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Msh6P54276 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC16.3■□□□□ 0.2
Msh6P54276 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh6P54276 Gm8385-201ENSMUST00000058999 643 ntBASIC16.3■□□□□ 0.2
Msh6P54276 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh6P54276 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Msh6P54276 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Msh6P54276 Gm10702-201ENSMUST00000098929 1268 ntBASIC16.3■□□□□ 0.2
Msh6P54276 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh6P54276 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh6P54276 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh6P54276 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh6P54276 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC16.3■□□□□ 0.2
Msh6P54276 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh6P54276 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh6P54276 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Msh6P54276 Gm45638-201ENSMUST00000211507 2878 ntBASIC16.3■□□□□ 0.2
Msh6P54276 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh6P54276 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh6P54276 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh6P54276 Gm43908-201ENSMUST00000205074 1472 ntBASIC16.3■□□□□ 0.2
Msh6P54276 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh6P54276 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh6P54276 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Msh6P54276 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh6P54276 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Msh6P54276 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Msh6P54276 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Msh6P54276 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh6P54276 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Msh6P54276 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Msh6P54276 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC16.29■□□□□ 0.2
Msh6P54276 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Msh6P54276 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC16.29■□□□□ 0.2
Msh6P54276 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC16.29■□□□□ 0.2
Msh6P54276 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Msh6P54276 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh6P54276 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Msh6P54276 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC16.29■□□□□ 0.2
Msh6P54276 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Msh6P54276 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Msh6P54276 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh6P54276 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh6P54276 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh6P54276 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Msh6P54276 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh6P54276 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh6P54276 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh6P54276 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Msh6P54276 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh6P54276 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Msh6P54276 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh6P54276 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh6P54276 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh6P54276 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh6P54276 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh6P54276 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh6P54276 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh6P54276 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh6P54276 Gm45706-201ENSMUST00000213063 2136 ntBASIC16.28■□□□□ 0.2
Msh6P54276 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh6P54276 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh6P54276 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Msh6P54276 Gm13736-201ENSMUST00000119272 253 ntBASIC16.28■□□□□ 0.2
Msh6P54276 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Msh6P54276 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC16.28■□□□□ 0.2
Msh6P54276 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC16.28■□□□□ 0.2
Msh6P54276 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Msh6P54276 Gm6652-201ENSMUST00000186414 1070 ntBASIC16.28■□□□□ 0.2
Msh6P54276 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC16.28■□□□□ 0.2
Msh6P54276 Gm18556-201ENSMUST00000219748 1031 ntBASIC16.28■□□□□ 0.2
Msh6P54276 AC154680.1-201ENSMUST00000224376 859 ntBASIC16.28■□□□□ 0.2
Msh6P54276 AC165260.3-202ENSMUST00000224550 1031 ntBASIC16.28■□□□□ 0.2
Msh6P54276 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh6P54276 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh6P54276 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms