Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.73□□□□□ -0.69
Nkx2-1P50220 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.73□□□□□ -0.69
Nkx2-1P50220 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.73□□□□□ -0.69
Nkx2-1P50220 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.73□□□□□ -0.69
Nkx2-1P50220 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.73□□□□□ -0.69
Nkx2-1P50220 Gm22175-201ENSMUST00000175007 78 ntBASIC10.73□□□□□ -0.69
Nkx2-1P50220 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Gm27533-201ENSMUST00000183800 152 ntBASIC10.73□□□□□ -0.69
Nkx2-1P50220 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.73□□□□□ -0.69
Nkx2-1P50220 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC10.73□□□□□ -0.69
Nkx2-1P50220 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.73□□□□□ -0.69
Nkx2-1P50220 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Nkx2-1P50220 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.73□□□□□ -0.69
Nkx2-1P50220 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-1P50220 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.72□□□□□ -0.69
Nkx2-1P50220 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC10.72□□□□□ -0.69
Nkx2-1P50220 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.72□□□□□ -0.69
Nkx2-1P50220 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms