Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox6P40645 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sox6P40645 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox6P40645 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox6P40645 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.18□□□□□ -0.46
Sox6P40645 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox6P40645 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox6P40645 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox6P40645 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox6P40645 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.18□□□□□ -0.46
Sox6P40645 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sox6P40645 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Sox6P40645 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Sox6P40645 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.18□□□□□ -0.46
Sox6P40645 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox6P40645 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox6P40645 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox6P40645 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox6P40645 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Sox6P40645 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox6P40645 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox6P40645 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox6P40645 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox6P40645 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox6P40645 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sox6P40645 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox6P40645 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox6P40645 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox6P40645 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox6P40645 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox6P40645 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox6P40645 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox6P40645 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox6P40645 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Sox6P40645 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.17□□□□□ -0.46
Sox6P40645 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox6P40645 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.17□□□□□ -0.46
Sox6P40645 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox6P40645 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.17□□□□□ -0.46
Sox6P40645 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox6P40645 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox6P40645 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox6P40645 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox6P40645 Gm15823-201ENSMUST00000064305 670 ntBASIC12.17□□□□□ -0.46
Sox6P40645 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox6P40645 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox6P40645 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox6P40645 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.17□□□□□ -0.46
Sox6P40645 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox6P40645 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox6P40645 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox6P40645 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox6P40645 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.17□□□□□ -0.46
Sox6P40645 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox6P40645 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sox6P40645 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox6P40645 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox6P40645 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox6P40645 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox6P40645 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox6P40645 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sox6P40645 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox6P40645 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox6P40645 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox6P40645 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox6P40645 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox6P40645 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Sox6P40645 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.16□□□□□ -0.46
Sox6P40645 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sox6P40645 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sox6P40645 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sox6P40645 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox6P40645 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox6P40645 Mir6392-201ENSMUST00000184924 108 ntBASIC12.16□□□□□ -0.46
Sox6P40645 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox6P40645 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox6P40645 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.16□□□□□ -0.46
Sox6P40645 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.16□□□□□ -0.46
Sox6P40645 Gm18624-201ENSMUST00000220966 658 ntBASIC12.16□□□□□ -0.46
Sox6P40645 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox6P40645 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox6P40645 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Sox6P40645 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.16□□□□□ -0.46
Sox6P40645 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox6P40645 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox6P40645 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox6P40645 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox6P40645 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox6P40645 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox6P40645 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox6P40645 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sox6P40645 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sox6P40645 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox6P40645 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox6P40645 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox6P40645 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Sox6P40645 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox6P40645 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox6P40645 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox6P40645 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms