Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp13P33435 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.26□□□□□ -0.29
Mmp13P33435 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp13P33435 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp13P33435 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp13P33435 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp13P33435 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp13P33435 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp13P33435 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp13P33435 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
Mmp13P33435 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Mmp13P33435 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.26□□□□□ -0.29
Mmp13P33435 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp13P33435 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.26□□□□□ -0.29
Mmp13P33435 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.26□□□□□ -0.29
Mmp13P33435 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp13P33435 Gm15429-201ENSMUST00000151268 798 ntBASIC13.26□□□□□ -0.29
Mmp13P33435 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp13P33435 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.26□□□□□ -0.29
Mmp13P33435 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.26□□□□□ -0.29
Mmp13P33435 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp13P33435 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp13P33435 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp13P33435 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp13P33435 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp13P33435 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Mmp13P33435 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp13P33435 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Mmp13P33435 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp13P33435 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Mmp13P33435 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.26□□□□□ -0.29
Mmp13P33435 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Mmp13P33435 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp13P33435 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp13P33435 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp13P33435 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp13P33435 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.25□□□□□ -0.29
Mmp13P33435 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp13P33435 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp13P33435 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp13P33435 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp13P33435 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp13P33435 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp13P33435 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp13P33435 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp13P33435 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp13P33435 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Mmp13P33435 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp13P33435 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp13P33435 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp13P33435 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp13P33435 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp13P33435 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.25□□□□□ -0.29
Mmp13P33435 Gm15806-201ENSMUST00000120696 955 ntBASIC13.25□□□□□ -0.29
Mmp13P33435 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Mmp13P33435 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.25□□□□□ -0.29
Mmp13P33435 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp13P33435 Gm9002-201ENSMUST00000178437 499 ntBASIC13.25□□□□□ -0.29
Mmp13P33435 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp13P33435 Gm38223-201ENSMUST00000194484 695 ntBASIC13.25□□□□□ -0.29
Mmp13P33435 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.25□□□□□ -0.29
Mmp13P33435 Gm42550-201ENSMUST00000201553 960 ntBASIC13.25□□□□□ -0.29
Mmp13P33435 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.25□□□□□ -0.29
Mmp13P33435 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.25□□□□□ -0.29
Mmp13P33435 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.25□□□□□ -0.29
Mmp13P33435 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp13P33435 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp13P33435 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Mmp13P33435 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp13P33435 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp13P33435 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp13P33435 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Mmp13P33435 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp13P33435 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp13P33435 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp13P33435 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Mmp13P33435 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp13P33435 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp13P33435 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp13P33435 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp13P33435 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp13P33435 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp13P33435 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp13P33435 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp13P33435 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp13P33435 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.24□□□□□ -0.29
Mmp13P33435 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp13P33435 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Mmp13P33435 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp13P33435 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp13P33435 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp13P33435 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp13P33435 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp13P33435 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp13P33435 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp13P33435 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp13P33435 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.24□□□□□ -0.29
Mmp13P33435 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.24□□□□□ -0.29
Mmp13P33435 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp13P33435 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms