Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nedd8P29595 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.93□□□□□ -0.5
Nedd8P29595 Gm6916-202ENSMUST00000205523 195 ntBASIC11.93□□□□□ -0.5
Nedd8P29595 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.93□□□□□ -0.5
Nedd8P29595 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nedd8P29595 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.93□□□□□ -0.5
Nedd8P29595 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nedd8P29595 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nedd8P29595 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nedd8P29595 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nedd8P29595 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nedd8P29595 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nedd8P29595 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Nedd8P29595 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.93□□□□□ -0.5
Nedd8P29595 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.93□□□□□ -0.5
Nedd8P29595 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nedd8P29595 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Nedd8P29595 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nedd8P29595 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.93□□□□□ -0.5
Nedd8P29595 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Nedd8P29595 Map1b-203ENSMUST00000223725 2669 ntBASIC11.93□□□□□ -0.5
Nedd8P29595 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.92□□□□□ -0.5
Nedd8P29595 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Nedd8P29595 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.92□□□□□ -0.5
Nedd8P29595 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Nedd8P29595 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.92□□□□□ -0.5
Nedd8P29595 Gm2810-201ENSMUST00000118681 990 ntBASIC11.92□□□□□ -0.5
Nedd8P29595 Gm13385-201ENSMUST00000121089 220 ntBASIC11.92□□□□□ -0.5
Nedd8P29595 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Nedd8P29595 Gm11452-201ENSMUST00000122376 690 ntBASIC11.92□□□□□ -0.5
Nedd8P29595 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.92□□□□□ -0.5
Nedd8P29595 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.92□□□□□ -0.5
Nedd8P29595 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.92□□□□□ -0.5
Nedd8P29595 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.92□□□□□ -0.5
Nedd8P29595 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Nedd8P29595 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Nedd8P29595 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.92□□□□□ -0.5
Nedd8P29595 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Nedd8P29595 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.92□□□□□ -0.5
Nedd8P29595 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nedd8P29595 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.91□□□□□ -0.5
Nedd8P29595 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.91□□□□□ -0.5
Nedd8P29595 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nedd8P29595 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Nedd8P29595 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nedd8P29595 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nedd8P29595 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nedd8P29595 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nedd8P29595 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nedd8P29595 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nedd8P29595 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nedd8P29595 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nedd8P29595 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nedd8P29595 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nedd8P29595 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nedd8P29595 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nedd8P29595 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nedd8P29595 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nedd8P29595 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nedd8P29595 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Nedd8P29595 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.91□□□□□ -0.5
Nedd8P29595 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.91□□□□□ -0.5
Nedd8P29595 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.91□□□□□ -0.5
Nedd8P29595 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nedd8P29595 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nedd8P29595 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Nedd8P29595 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nedd8P29595 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nedd8P29595 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Nedd8P29595 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.91□□□□□ -0.5
Nedd8P29595 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nedd8P29595 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms