Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.86□□□□□ -0.51
P01852 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.86□□□□□ -0.51
P01852 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
P01852 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01852 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
P01852 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01852 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
P01852 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01852 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01852 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01852 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
P01852 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.86□□□□□ -0.51
P01852 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01852 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01852 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01852 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
P01852 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
P01852 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
P01852 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01852 Gm13123-201ENSMUST00000122173 492 ntBASIC11.86□□□□□ -0.51
P01852 Gm11978-201ENSMUST00000122315 466 ntBASIC11.86□□□□□ -0.51
P01852 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
P01852 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
P01852 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01852 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01852 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
P01852 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01852 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01852 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01852 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
P01852 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
P01852 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01852 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
P01852 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01852 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01852 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01852 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01852 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01852 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
P01852 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
P01852 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.85□□□□□ -0.51
P01852 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
P01852 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P01852 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.85□□□□□ -0.51
P01852 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P01852 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P01852 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.85□□□□□ -0.51
P01852 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P01852 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P01852 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P01852 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
P01852 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P01852 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P01852 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.85□□□□□ -0.51
P01852 Gm13369-201ENSMUST00000119442 987 ntBASIC11.85□□□□□ -0.51
P01852 Mir1982-201ENSMUST00000157368 74 ntBASIC11.85□□□□□ -0.51
P01852 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.85□□□□□ -0.51
P01852 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.85□□□□□ -0.51
P01852 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.85□□□□□ -0.51
P01852 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P01852 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P01852 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P01852 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.85□□□□□ -0.51
P01852 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.85□□□□□ -0.51
P01852 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.85□□□□□ -0.51
P01852 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P01852 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.85□□□□□ -0.51
P01852 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P01852 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P01852 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P01852 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P01852 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P01852 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P01852 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P01852 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P01852 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P01852 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
P01852 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P01852 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.84□□□□□ -0.51
P01852 Pck2-205ENSMUST00000226352 2784 ntBASIC11.84□□□□□ -0.51
P01852 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01852 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01852 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
P01852 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.84□□□□□ -0.51
P01852 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01852 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
P01852 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01852 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01852 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01852 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01852 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01852 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01852 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01852 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01852 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P01852 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01852 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01852 Gm2231-201ENSMUST00000125661 612 ntBASIC11.84□□□□□ -0.51
P01852 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.84□□□□□ -0.51
P01852 Gm27731-201ENSMUST00000185192 107 ntBASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms