Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Gm9111-201ENSMUST00000219394 709 ntBASIC15.84■□□□□ 0.13
Ccdc85cE9Q6B2 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc85cE9Q6B2 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC15.84■□□□□ 0.13
Ccdc85cE9Q6B2 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc85cE9Q6B2 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc85cE9Q6B2 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc85cE9Q6B2 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc85cE9Q6B2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.84■□□□□ 0.13
Ccdc85cE9Q6B2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Ccdc85cE9Q6B2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc85cE9Q6B2 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc85cE9Q6B2 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc85cE9Q6B2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc85cE9Q6B2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc85cE9Q6B2 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc85cE9Q6B2 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.84■□□□□ 0.13
Ccdc85cE9Q6B2 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc85cE9Q6B2 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Ccdc85cE9Q6B2 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc85cE9Q6B2 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Ccdc85cE9Q6B2 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc85cE9Q6B2 AC130671.2-201ENSMUST00000227224 1621 ntBASIC15.83■□□□□ 0.13
Ccdc85cE9Q6B2 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ccdc85cE9Q6B2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ccdc85cE9Q6B2 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc85cE9Q6B2 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.83■□□□□ 0.12
Ccdc85cE9Q6B2 Gm1848-201ENSMUST00000120711 789 ntBASIC15.83■□□□□ 0.12
Ccdc85cE9Q6B2 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC15.83■□□□□ 0.12
Ccdc85cE9Q6B2 Gm5852-201ENSMUST00000194119 1021 ntBASIC15.83■□□□□ 0.12
Ccdc85cE9Q6B2 Gm5542-201ENSMUST00000195485 1089 ntBASIC15.83■□□□□ 0.12
Ccdc85cE9Q6B2 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC15.83■□□□□ 0.12
Ccdc85cE9Q6B2 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Ccdc85cE9Q6B2 Gm44552-201ENSMUST00000205458 1247 ntBASIC15.83■□□□□ 0.12
Ccdc85cE9Q6B2 Gm17827-201ENSMUST00000211825 742 ntBASIC15.83■□□□□ 0.12
Ccdc85cE9Q6B2 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc85cE9Q6B2 Gm25201-201ENSMUST00000083093 170 ntBASIC15.83■□□□□ 0.12
Ccdc85cE9Q6B2 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc85cE9Q6B2 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc85cE9Q6B2 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc85cE9Q6B2 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc85cE9Q6B2 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc85cE9Q6B2 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Ccdc85cE9Q6B2 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Ccdc85cE9Q6B2 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc85cE9Q6B2 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Gm22133-201ENSMUST00000102082 109 ntBASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Gm24891-201ENSMUST00000104391 136 ntBASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Gm13668-201ENSMUST00000119237 1001 ntBASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Mir1956-201ENSMUST00000157748 65 ntBASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Gm5298-201ENSMUST00000201122 892 ntBASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Gm270-201ENSMUST00000223010 976 ntBASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.82■□□□□ 0.12
Ccdc85cE9Q6B2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc85cE9Q6B2 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc85cE9Q6B2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ccdc85cE9Q6B2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc85cE9Q6B2 Gm23596-201ENSMUST00000104304 132 ntBASIC15.81■□□□□ 0.12
Ccdc85cE9Q6B2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc85cE9Q6B2 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Ccdc85cE9Q6B2 Gm13384-201ENSMUST00000117166 1344 ntBASIC15.81■□□□□ 0.12
Ccdc85cE9Q6B2 Gm11470-201ENSMUST00000118868 1475 ntBASIC15.81■□□□□ 0.12
Ccdc85cE9Q6B2 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC15.81■□□□□ 0.12
Ccdc85cE9Q6B2 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC15.81■□□□□ 0.12
Ccdc85cE9Q6B2 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc85cE9Q6B2 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms