Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx6-2D3Z4R4 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Nkx6-2D3Z4R4 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx6-2D3Z4R4 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx6-2D3Z4R4 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Nkx6-2D3Z4R4 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.73
Nkx6-2D3Z4R4 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx6-2D3Z4R4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC10.46□□□□□ -0.73
Nkx6-2D3Z4R4 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC10.46□□□□□ -0.73
Nkx6-2D3Z4R4 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Nkx6-2D3Z4R4 Gm44608-201ENSMUST00000206827 855 ntBASIC10.46□□□□□ -0.73
Nkx6-2D3Z4R4 Gm45167-201ENSMUST00000208007 322 ntBASIC10.46□□□□□ -0.73
Nkx6-2D3Z4R4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC10.46□□□□□ -0.73
Nkx6-2D3Z4R4 AC123645.1-201ENSMUST00000228469 605 ntBASIC10.46□□□□□ -0.73
Nkx6-2D3Z4R4 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx6-2D3Z4R4 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx6-2D3Z4R4 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx6-2D3Z4R4 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.73
Nkx6-2D3Z4R4 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx6-2D3Z4R4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx6-2D3Z4R4 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx6-2D3Z4R4 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx6-2D3Z4R4 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx6-2D3Z4R4 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx6-2D3Z4R4 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.46□□□□□ -0.74
Nkx6-2D3Z4R4 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Nkx6-2D3Z4R4 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx6-2D3Z4R4 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx6-2D3Z4R4 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx6-2D3Z4R4 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx6-2D3Z4R4 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Gm18856-201ENSMUST00000178096 1374 ntBASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Gm29741-201ENSMUST00000192667 421 ntBASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Gm33142-201ENSMUST00000193913 867 ntBASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 AC147366.1-201ENSMUST00000227671 852 ntBASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Nkx6-2D3Z4R4 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-2D3Z4R4 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.44□□□□□ -0.74
Nkx6-2D3Z4R4 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-2D3Z4R4 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-2D3Z4R4 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-2D3Z4R4 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
Nkx6-2D3Z4R4 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-2D3Z4R4 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-2D3Z4R4 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-2D3Z4R4 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-2D3Z4R4 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-2D3Z4R4 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-2D3Z4R4 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms