Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Usp42B2RQC2 Gm25927-201ENSMUST00000175058 117 ntBASIC15.13■□□□□ 0.01
Usp42B2RQC2 Gm6222-202ENSMUST00000182143 629 ntBASIC15.13■□□□□ 0.01
Usp42B2RQC2 Gm27514-201ENSMUST00000183692 110 ntBASIC15.13■□□□□ 0.01
Usp42B2RQC2 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.13■□□□□ 0.01
Usp42B2RQC2 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC15.13■□□□□ 0.01
Usp42B2RQC2 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.13■□□□□ 0.01
Usp42B2RQC2 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp42B2RQC2 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Usp42B2RQC2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp42B2RQC2 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Usp42B2RQC2 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Usp42B2RQC2 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp42B2RQC2 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Usp42B2RQC2 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.12■□□□□ 0.01
Usp42B2RQC2 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Usp42B2RQC2 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Gm6210-201ENSMUST00000204734 1942 ntBASIC15.12■□□□□ 0.01
Usp42B2RQC2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Gm11591-201ENSMUST00000120063 702 ntBASIC15.12■□□□□ 0.01
Usp42B2RQC2 Gm25261-201ENSMUST00000157416 134 ntBASIC15.12■□□□□ 0.01
Usp42B2RQC2 Snora78-201ENSMUST00000158630 128 ntBASIC15.12■□□□□ 0.01
Usp42B2RQC2 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.12■□□□□ 0.01
Usp42B2RQC2 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Gm8565-201ENSMUST00000183259 1014 ntBASIC15.12■□□□□ 0.01
Usp42B2RQC2 Mir7085-201ENSMUST00000184353 66 ntBASIC15.12■□□□□ 0.01
Usp42B2RQC2 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp42B2RQC2 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp42B2RQC2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp42B2RQC2 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC15.11■□□□□ 0.01
Usp42B2RQC2 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp42B2RQC2 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp42B2RQC2 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp42B2RQC2 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp42B2RQC2 Gm8793-201ENSMUST00000183069 1303 ntBASIC15.11■□□□□ 0.01
Usp42B2RQC2 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.11■□□□□ 0.01
Usp42B2RQC2 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15.11■□□□□ 0.01
Usp42B2RQC2 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp42B2RQC2 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp42B2RQC2 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp42B2RQC2 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.11■□□□□ 0.01
Usp42B2RQC2 Gm38092-201ENSMUST00000195600 653 ntBASIC15.11■□□□□ 0.01
Usp42B2RQC2 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.11■□□□□ 0.01
Usp42B2RQC2 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.11■□□□□ 0.01
Usp42B2RQC2 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.11■□□□□ 0.01
Usp42B2RQC2 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp42B2RQC2 n-R5s195-201ENSMUST00000082891 119 ntBASIC15.11■□□□□ 0.01
Usp42B2RQC2 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp42B2RQC2 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp42B2RQC2 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp42B2RQC2 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp42B2RQC2 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp42B2RQC2 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp42B2RQC2 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp42B2RQC2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp42B2RQC2 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp42B2RQC2 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp42B2RQC2 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC15.1■□□□□ 0.01
Usp42B2RQC2 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp42B2RQC2 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp42B2RQC2 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Usp42B2RQC2 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Usp42B2RQC2 Gm43579-201ENSMUST00000202387 1307 ntBASIC15.1■□□□□ 0.01
Usp42B2RQC2 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp42B2RQC2 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Usp42B2RQC2 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Usp42B2RQC2 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp42B2RQC2 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp42B2RQC2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Usp42B2RQC2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp42B2RQC2 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Usp42B2RQC2 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms