Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 Gm43579-201ENSMUST00000202387 1307 ntBASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 Gm2231-201ENSMUST00000125661 612 ntBASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 Gm5637-201ENSMUST00000153890 1119 ntBASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 Gm6334-201ENSMUST00000207083 228 ntBASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cfap99A0A140LIX9 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Gm18630-201ENSMUST00000222109 1397 ntBASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Gm6203-201ENSMUST00000209575 1342 ntBASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Gm14350-201ENSMUST00000116642 640 ntBASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Gm13786-201ENSMUST00000122371 333 ntBASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Gm38000-201ENSMUST00000192390 1215 ntBASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Cfap99A0A140LIX9 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 Gm13123-201ENSMUST00000122173 492 ntBASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 Gm27320-201ENSMUST00000184892 109 ntBASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cfap99A0A140LIX9 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms