Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Gm8213-201ENSMUST00000118191 441 ntBASIC12.15□□□□□ -0.46
Cldn6Q9Z262 Gm11803-201ENSMUST00000119966 444 ntBASIC12.15□□□□□ -0.46
Cldn6Q9Z262 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn6Q9Z262 Gm8810-201ENSMUST00000172895 754 ntBASIC12.15□□□□□ -0.46
Cldn6Q9Z262 Gm27892-201ENSMUST00000185017 106 ntBASIC12.15□□□□□ -0.46
Cldn6Q9Z262 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn6Q9Z262 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn6Q9Z262 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cldn6Q9Z262 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.15□□□□□ -0.46
Cldn6Q9Z262 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn6Q9Z262 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn6Q9Z262 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cldn6Q9Z262 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn6Q9Z262 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn6Q9Z262 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn6Q9Z262 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.15□□□□□ -0.46
Cldn6Q9Z262 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn6Q9Z262 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn6Q9Z262 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn6Q9Z262 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Cldn6Q9Z262 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cldn6Q9Z262 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cldn6Q9Z262 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Gm15806-201ENSMUST00000120696 955 ntBASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Gm13123-201ENSMUST00000122173 492 ntBASIC12.14□□□□□ -0.47
Cldn6Q9Z262 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Gm9002-201ENSMUST00000178437 499 ntBASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Gm17794-201ENSMUST00000220252 955 ntBASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn6Q9Z262 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Gm8652-201ENSMUST00000181363 964 ntBASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Gm37922-201ENSMUST00000195596 455 ntBASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Gm10012-201ENSMUST00000078252 192 ntBASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn6Q9Z262 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms