Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ssbp3Q9D032 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ssbp3Q9D032 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ssbp3Q9D032 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ssbp3Q9D032 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ssbp3Q9D032 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ssbp3Q9D032 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ssbp3Q9D032 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ssbp3Q9D032 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ssbp3Q9D032 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ssbp3Q9D032 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC10.84□□□□□ -0.67
Ssbp3Q9D032 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.84□□□□□ -0.67
Ssbp3Q9D032 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ssbp3Q9D032 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ssbp3Q9D032 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Gm14752-201ENSMUST00000120719 2075 ntBASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Gm27682-201ENSMUST00000183930 110 ntBASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.83□□□□□ -0.68
Ssbp3Q9D032 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.83□□□□□ -0.68
Ssbp3Q9D032 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.82□□□□□ -0.68
Ssbp3Q9D032 Gm26185-201ENSMUST00000157692 266 ntBASIC10.82□□□□□ -0.68
Ssbp3Q9D032 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 Gm43630-201ENSMUST00000201550 776 ntBASIC10.82□□□□□ -0.68
Ssbp3Q9D032 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.82□□□□□ -0.68
Ssbp3Q9D032 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ssbp3Q9D032 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms