Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.92□□□□□ -0.02
Rfc4Q99J62 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.92□□□□□ -0.02
Rfc4Q99J62 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rfc4Q99J62 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Rfc4Q99J62 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfc4Q99J62 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rfc4Q99J62 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfc4Q99J62 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfc4Q99J62 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.92□□□□□ -0.02
Rfc4Q99J62 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfc4Q99J62 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfc4Q99J62 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfc4Q99J62 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.92□□□□□ -0.02
Rfc4Q99J62 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfc4Q99J62 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfc4Q99J62 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfc4Q99J62 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfc4Q99J62 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfc4Q99J62 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfc4Q99J62 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfc4Q99J62 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc4Q99J62 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc4Q99J62 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc4Q99J62 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.91□□□□□ -0.02
Rfc4Q99J62 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.91□□□□□ -0.02
Rfc4Q99J62 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.91□□□□□ -0.02
Rfc4Q99J62 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc4Q99J62 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rfc4Q99J62 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.91□□□□□ -0.02
Rfc4Q99J62 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc4Q99J62 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc4Q99J62 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc4Q99J62 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.91□□□□□ -0.02
Rfc4Q99J62 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc4Q99J62 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc4Q99J62 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc4Q99J62 Gm7857-201ENSMUST00000117957 358 ntBASIC14.91□□□□□ -0.02
Rfc4Q99J62 Gm13492-201ENSMUST00000119772 665 ntBASIC14.91□□□□□ -0.02
Rfc4Q99J62 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc4Q99J62 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Rfc4Q99J62 Gm26361-201ENSMUST00000158868 186 ntBASIC14.91□□□□□ -0.02
Rfc4Q99J62 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.91□□□□□ -0.02
Rfc4Q99J62 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc4Q99J62 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.91□□□□□ -0.02
Rfc4Q99J62 Gm3096-201ENSMUST00000185770 364 ntBASIC14.91□□□□□ -0.02
Rfc4Q99J62 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.91□□□□□ -0.02
Rfc4Q99J62 Gm42997-202ENSMUST00000200321 985 ntBASIC14.91□□□□□ -0.02
Rfc4Q99J62 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.91□□□□□ -0.02
Rfc4Q99J62 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.91□□□□□ -0.02
Rfc4Q99J62 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc4Q99J62 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc4Q99J62 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc4Q99J62 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc4Q99J62 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc4Q99J62 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.91□□□□□ -0.02
Rfc4Q99J62 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc4Q99J62 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.91□□□□□ -0.02
Rfc4Q99J62 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rfc4Q99J62 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.91□□□□□ -0.02
Rfc4Q99J62 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rfc4Q99J62 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.91□□□□□ -0.02
Rfc4Q99J62 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.91□□□□□ -0.02
Rfc4Q99J62 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc4Q99J62 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfc4Q99J62 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc4Q99J62 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc4Q99J62 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc4Q99J62 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc4Q99J62 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc4Q99J62 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc4Q99J62 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc4Q99J62 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Rfc4Q99J62 Gm14109-201ENSMUST00000118814 309 ntBASIC14.9□□□□□ -0.02
Rfc4Q99J62 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.9□□□□□ -0.02
Rfc4Q99J62 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.9□□□□□ -0.02
Rfc4Q99J62 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Rfc4Q99J62 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.9□□□□□ -0.02
Rfc4Q99J62 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Rfc4Q99J62 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.9□□□□□ -0.02
Rfc4Q99J62 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc4Q99J62 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc4Q99J62 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc4Q99J62 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc4Q99J62 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.9□□□□□ -0.02
Rfc4Q99J62 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc4Q99J62 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Rfc4Q99J62 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfc4Q99J62 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rfc4Q99J62 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Rfc4Q99J62 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfc4Q99J62 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfc4Q99J62 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rfc4Q99J62 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfc4Q99J62 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.89□□□□□ -0.03
Rfc4Q99J62 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rfc4Q99J62 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rfc4Q99J62 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfc4Q99J62 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rfc4Q99J62 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.89□□□□□ -0.03
Rfc4Q99J62 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms