Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slf1Q8R3P9 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Gm44344-201ENSMUST00000200287 129 ntBASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Gm6888-201ENSMUST00000221983 706 ntBASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slf1Q8R3P9 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Gm14767-201ENSMUST00000121559 586 ntBASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Gm21470-201ENSMUST00000187680 696 ntBASIC13.1□□□□□ -0.31
Slf1Q8R3P9 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slf1Q8R3P9 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms