Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab43Q8CG50 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rab43Q8CG50 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rab43Q8CG50 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.66□□□□□ -0.38
Rab43Q8CG50 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab43Q8CG50 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab43Q8CG50 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rab43Q8CG50 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Snord83b-201ENSMUST00000104546 94 ntBASIC12.65□□□□□ -0.38
Rab43Q8CG50 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rab43Q8CG50 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.65□□□□□ -0.38
Rab43Q8CG50 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.65□□□□□ -0.38
Rab43Q8CG50 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.65□□□□□ -0.38
Rab43Q8CG50 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.65□□□□□ -0.38
Rab43Q8CG50 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.65□□□□□ -0.38
Rab43Q8CG50 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab43Q8CG50 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab43Q8CG50 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab43Q8CG50 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.65□□□□□ -0.38
Rab43Q8CG50 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rab43Q8CG50 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rab43Q8CG50 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
Rab43Q8CG50 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rab43Q8CG50 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Rab43Q8CG50 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.65□□□□□ -0.39
Rab43Q8CG50 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab43Q8CG50 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab43Q8CG50 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.64□□□□□ -0.39
Rab43Q8CG50 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.64□□□□□ -0.39
Rab43Q8CG50 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Gm5363-201ENSMUST00000211927 938 ntBASIC12.64□□□□□ -0.39
Rab43Q8CG50 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.64□□□□□ -0.39
Rab43Q8CG50 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab43Q8CG50 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab43Q8CG50 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rab43Q8CG50 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms