Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rft1Q8C3B8 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.61□□□□□ -0.55
Rft1Q8C3B8 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Gm28631-201ENSMUST00000190740 334 ntBASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.61□□□□□ -0.55
Rft1Q8C3B8 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Mir698-201ENSMUST00000102164 109 ntBASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Gm13385-201ENSMUST00000121089 220 ntBASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Gm18905-201ENSMUST00000205454 928 ntBASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms