Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.31□□□□□ -0.28
Chmp2bQ8BJF9 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Gm6447-201ENSMUST00000118905 835 ntBASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Gm14719-201ENSMUST00000121891 340 ntBASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Gm24694-201ENSMUST00000180054 110 ntBASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Mir7684-201ENSMUST00000183858 60 ntBASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Gm27663-201ENSMUST00000184839 110 ntBASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Gm42550-201ENSMUST00000201553 960 ntBASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp2bQ8BJF9 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Matn2-203ENSMUST00000226766 3252 ntBASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Gm15321-201ENSMUST00000121290 288 ntBASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Mir8102-201ENSMUST00000184148 139 ntBASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2bQ8BJF9 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms