Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Gm6447-201ENSMUST00000118905 835 ntBASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Snora78-201ENSMUST00000158630 128 ntBASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Gm18473-201ENSMUST00000220543 868 ntBASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Depdc1bQ8BH88 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Gm24196-201ENSMUST00000179161 110 ntBASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Gm29649-201ENSMUST00000185649 419 ntBASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Gm6091-201ENSMUST00000098307 165 ntBASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Depdc1bQ8BH88 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Depdc1bQ8BH88 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Depdc1bQ8BH88 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Depdc1bQ8BH88 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.1□□□□□ -0.15
Depdc1bQ8BH88 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Depdc1bQ8BH88 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Depdc1bQ8BH88 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Depdc1bQ8BH88 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Depdc1bQ8BH88 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Depdc1bQ8BH88 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Depdc1bQ8BH88 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Depdc1bQ8BH88 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Depdc1bQ8BH88 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Depdc1bQ8BH88 Gm12957-201ENSMUST00000117835 377 ntBASIC14.1□□□□□ -0.15
Depdc1bQ8BH88 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.1□□□□□ -0.15
Depdc1bQ8BH88 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.1□□□□□ -0.15
Depdc1bQ8BH88 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.1□□□□□ -0.15
Depdc1bQ8BH88 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Depdc1bQ8BH88 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.1□□□□□ -0.15
Depdc1bQ8BH88 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms