Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Gm7809-201ENSMUST00000153199 742 ntBASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Gm4909-201ENSMUST00000118749 794 ntBASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.98□□□□□ -0.01
Prpf40bQ80W14 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Gm2260-201ENSMUST00000184965 657 ntBASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Gm16372-201ENSMUST00000073088 450 ntBASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Prpf40bQ80W14 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40bQ80W14 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40bQ80W14 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Gm13123-201ENSMUST00000122173 492 ntBASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Gm38144-201ENSMUST00000192790 465 ntBASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.97□□□□□ -0.01
Prpf40bQ80W14 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.97□□□□□ -0.01
Prpf40bQ80W14 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40bQ80W14 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms