Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Gm13736-201ENSMUST00000119272 253 ntBASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Mir7032-201ENSMUST00000185154 79 ntBASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Gm45118-201ENSMUST00000208928 825 ntBASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Gm45433-201ENSMUST00000209386 247 ntBASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Snrnp40Q6PE01 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms