Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.51□□□□□ -0.41
Sdc3Q64519 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.51□□□□□ -0.41
Sdc3Q64519 Gm8805-201ENSMUST00000117848 313 ntBASIC12.51□□□□□ -0.41
Sdc3Q64519 Gm1335-201ENSMUST00000121653 386 ntBASIC12.51□□□□□ -0.41
Sdc3Q64519 Gm13123-201ENSMUST00000122173 492 ntBASIC12.51□□□□□ -0.41
Sdc3Q64519 Gm4271-201ENSMUST00000174444 973 ntBASIC12.51□□□□□ -0.41
Sdc3Q64519 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Gm27572-201ENSMUST00000183702 255 ntBASIC12.51□□□□□ -0.41
Sdc3Q64519 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sdc3Q64519 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.51□□□□□ -0.41
Sdc3Q64519 Gm45841-201ENSMUST00000207700 164 ntBASIC12.51□□□□□ -0.41
Sdc3Q64519 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Gm9899-201ENSMUST00000065519 555 ntBASIC12.51□□□□□ -0.41
Sdc3Q64519 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Sdc3Q64519 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sdc3Q64519 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc3Q64519 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc3Q64519 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc3Q64519 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc3Q64519 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc3Q64519 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc3Q64519 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc3Q64519 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sdc3Q64519 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc3Q64519 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc3Q64519 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc3Q64519 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sdc3Q64519 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc3Q64519 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.5□□□□□ -0.41
Sdc3Q64519 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.5□□□□□ -0.41
Sdc3Q64519 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc3Q64519 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc3Q64519 Gm37424-201ENSMUST00000191727 561 ntBASIC12.5□□□□□ -0.41
Sdc3Q64519 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc3Q64519 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.5□□□□□ -0.41
Sdc3Q64519 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc3Q64519 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.5□□□□□ -0.41
Sdc3Q64519 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.5□□□□□ -0.41
Sdc3Q64519 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.5□□□□□ -0.41
Sdc3Q64519 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc3Q64519 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc3Q64519 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc3Q64519 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc3Q64519 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.5□□□□□ -0.41
Sdc3Q64519 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.5□□□□□ -0.41
Sdc3Q64519 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc3Q64519 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc3Q64519 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc3Q64519 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc3Q64519 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc3Q64519 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc3Q64519 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc3Q64519 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc3Q64519 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.49□□□□□ -0.41
Sdc3Q64519 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc3Q64519 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc3Q64519 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc3Q64519 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc3Q64519 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc3Q64519 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.49□□□□□ -0.41
Sdc3Q64519 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.49□□□□□ -0.41
Sdc3Q64519 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.49□□□□□ -0.41
Sdc3Q64519 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Sdc3Q64519 Gm13392-201ENSMUST00000117708 150 ntBASIC12.49□□□□□ -0.41
Sdc3Q64519 Gm12384-201ENSMUST00000119228 919 ntBASIC12.49□□□□□ -0.41
Sdc3Q64519 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Sdc3Q64519 Snora78-201ENSMUST00000158630 128 ntBASIC12.49□□□□□ -0.41
Sdc3Q64519 Gm17420-201ENSMUST00000164753 153 ntBASIC12.49□□□□□ -0.41
Sdc3Q64519 Gm5370-201ENSMUST00000187187 574 ntBASIC12.49□□□□□ -0.41
Sdc3Q64519 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.49□□□□□ -0.41
Sdc3Q64519 Gm44069-201ENSMUST00000204898 506 ntBASIC12.49□□□□□ -0.41
Sdc3Q64519 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.49□□□□□ -0.41
Sdc3Q64519 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc3Q64519 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc3Q64519 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms