Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn9aQ62205 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn9aQ62205 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Scn9aQ62205 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn9aQ62205 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn9aQ62205 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scn9aQ62205 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Scn9aQ62205 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Scn9aQ62205 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scn9aQ62205 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.98□□□□□ -0.01
Scn9aQ62205 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC14.98□□□□□ -0.01
Scn9aQ62205 Gm8492-201ENSMUST00000182375 987 ntBASIC14.98□□□□□ -0.01
Scn9aQ62205 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.98□□□□□ -0.01
Scn9aQ62205 CT485607.1-201ENSMUST00000216100 85 ntBASIC14.98□□□□□ -0.01
Scn9aQ62205 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Scn9aQ62205 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Scn9aQ62205 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Scn9aQ62205 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn9aQ62205 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn9aQ62205 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn9aQ62205 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Scn9aQ62205 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn9aQ62205 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn9aQ62205 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn9aQ62205 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.97□□□□□ -0.01
Scn9aQ62205 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Scn9aQ62205 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn9aQ62205 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn9aQ62205 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Scn9aQ62205 Gm15703-201ENSMUST00000120250 880 ntBASIC14.97□□□□□ -0.01
Scn9aQ62205 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC14.97□□□□□ -0.01
Scn9aQ62205 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC14.97□□□□□ -0.01
Scn9aQ62205 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.97□□□□□ -0.01
Scn9aQ62205 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn9aQ62205 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn9aQ62205 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Scn9aQ62205 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn9aQ62205 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn9aQ62205 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.97□□□□□ -0.01
Scn9aQ62205 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.97□□□□□ -0.01
Scn9aQ62205 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Scn9aQ62205 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.97□□□□□ -0.01
Scn9aQ62205 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Scn9aQ62205 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Scn9aQ62205 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Scn9aQ62205 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn9aQ62205 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.97□□□□□ -0.01
Scn9aQ62205 Gm11340-201ENSMUST00000119226 412 ntBASIC14.96□□□□□ -0.01
Scn9aQ62205 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Scn9aQ62205 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.96□□□□□ -0.01
Scn9aQ62205 Gm10774-201ENSMUST00000188689 204 ntBASIC14.96□□□□□ -0.01
Scn9aQ62205 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Scn9aQ62205 Gm4482-201ENSMUST00000200876 742 ntBASIC14.96□□□□□ -0.01
Scn9aQ62205 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn9aQ62205 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn9aQ62205 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn9aQ62205 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Scn9aQ62205 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn9aQ62205 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn9aQ62205 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Scn9aQ62205 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.96□□□□□ -0.01
Scn9aQ62205 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn9aQ62205 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.96□□□□□ -0.01
Scn9aQ62205 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Scn9aQ62205 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Scn9aQ62205 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn9aQ62205 AC169511.2-201ENSMUST00000226674 2063 ntBASIC14.96□□□□□ -0.01
Scn9aQ62205 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Scn9aQ62205 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn9aQ62205 Gm12899-201ENSMUST00000120565 551 ntBASIC14.96□□□□□ -0.01
Scn9aQ62205 Mir1901-201ENSMUST00000122616 78 ntBASIC14.96□□□□□ -0.01
Scn9aQ62205 Gm22138-201ENSMUST00000158748 128 ntBASIC14.96□□□□□ -0.01
Scn9aQ62205 Gm29155-201ENSMUST00000185910 269 ntBASIC14.96□□□□□ -0.01
Scn9aQ62205 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC14.96□□□□□ -0.01
Scn9aQ62205 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC14.96□□□□□ -0.01
Scn9aQ62205 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC14.96□□□□□ -0.01
Scn9aQ62205 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn9aQ62205 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Scn9aQ62205 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Scn9aQ62205 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Scn9aQ62205 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.96□□□□□ -0.02
Scn9aQ62205 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Scn9aQ62205 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.96□□□□□ -0.02
Scn9aQ62205 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Scn9aQ62205 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Scn9aQ62205 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Scn9aQ62205 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.95□□□□□ -0.02
Scn9aQ62205 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn9aQ62205 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn9aQ62205 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Scn9aQ62205 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn9aQ62205 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Scn9aQ62205 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn9aQ62205 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn9aQ62205 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn9aQ62205 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Scn9aQ62205 Gm11892-201ENSMUST00000117711 1202 ntBASIC14.95□□□□□ -0.02
Scn9aQ62205 Gm23119-201ENSMUST00000158610 140 ntBASIC14.95□□□□□ -0.02
Scn9aQ62205 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Scn9aQ62205 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms