Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd4Q60688 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Foxd4Q60688 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.63□□□□□ -0.23
Foxd4Q60688 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd4Q60688 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd4Q60688 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Foxd4Q60688 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.63□□□□□ -0.23
Foxd4Q60688 E130114P18Rik-201ENSMUST00000107067 1092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd4Q60688 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.63□□□□□ -0.23
Foxd4Q60688 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd4Q60688 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd4Q60688 Gm4875-201ENSMUST00000118257 786 ntBASIC13.63□□□□□ -0.23
Foxd4Q60688 Gm15653-201ENSMUST00000119247 907 ntBASIC13.63□□□□□ -0.23
Foxd4Q60688 Gm13385-201ENSMUST00000121089 220 ntBASIC13.63□□□□□ -0.23
Foxd4Q60688 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC13.63□□□□□ -0.23
Foxd4Q60688 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.63□□□□□ -0.23
Foxd4Q60688 Gm9499-201ENSMUST00000180888 964 ntBASIC13.63□□□□□ -0.23
Foxd4Q60688 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.63□□□□□ -0.23
Foxd4Q60688 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd4Q60688 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd4Q60688 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Foxd4Q60688 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd4Q60688 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd4Q60688 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd4Q60688 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd4Q60688 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd4Q60688 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.63□□□□□ -0.23
Foxd4Q60688 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd4Q60688 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd4Q60688 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd4Q60688 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd4Q60688 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd4Q60688 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd4Q60688 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxd4Q60688 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Foxd4Q60688 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd4Q60688 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd4Q60688 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd4Q60688 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd4Q60688 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd4Q60688 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd4Q60688 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd4Q60688 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Foxd4Q60688 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd4Q60688 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Foxd4Q60688 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd4Q60688 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd4Q60688 Mir698-201ENSMUST00000102164 109 ntBASIC13.62□□□□□ -0.23
Foxd4Q60688 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Foxd4Q60688 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd4Q60688 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd4Q60688 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Foxd4Q60688 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Foxd4Q60688 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.62□□□□□ -0.23
Foxd4Q60688 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd4Q60688 Gm3760-201ENSMUST00000167475 804 ntBASIC13.62□□□□□ -0.23
Foxd4Q60688 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.62□□□□□ -0.23
Foxd4Q60688 Gm3650-201ENSMUST00000180600 747 ntBASIC13.62□□□□□ -0.23
Foxd4Q60688 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd4Q60688 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.62□□□□□ -0.23
Foxd4Q60688 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd4Q60688 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC13.62□□□□□ -0.23
Foxd4Q60688 Gm42464-201ENSMUST00000196717 417 ntBASIC13.62□□□□□ -0.23
Foxd4Q60688 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC13.62□□□□□ -0.23
Foxd4Q60688 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Foxd4Q60688 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC13.62□□□□□ -0.23
Foxd4Q60688 AC160962.2-201ENSMUST00000224761 632 ntBASIC13.62□□□□□ -0.23
Foxd4Q60688 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.62□□□□□ -0.23
Foxd4Q60688 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Foxd4Q60688 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd4Q60688 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Foxd4Q60688 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd4Q60688 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd4Q60688 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.62□□□□□ -0.23
Foxd4Q60688 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd4Q60688 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd4Q60688 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Foxd4Q60688 AC154806.5-202ENSMUST00000227217 1443 ntBASIC13.62□□□□□ -0.23
Foxd4Q60688 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd4Q60688 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd4Q60688 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd4Q60688 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.62□□□□□ -0.23
Foxd4Q60688 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd4Q60688 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxd4Q60688 AC151904.4-201ENSMUST00000219868 1319 ntBASIC13.62□□□□□ -0.23
Foxd4Q60688 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.61□□□□□ -0.23
Foxd4Q60688 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Foxd4Q60688 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms