Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Gm4366-201ENSMUST00000201488 1342 ntBASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Snord83b-201ENSMUST00000104546 94 ntBASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Gm13461-201ENSMUST00000120980 662 ntBASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Gm29787-201ENSMUST00000222129 849 ntBASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx49Q4FZF3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx49Q4FZF3 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ddx49Q4FZF3 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx49Q4FZF3 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ddx49Q4FZF3 Gm5846-201ENSMUST00000193146 1414 ntBASIC15.1■□□□□ 0.01
Ddx49Q4FZF3 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx49Q4FZF3 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx49Q4FZF3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx49Q4FZF3 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx49Q4FZF3 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx49Q4FZF3 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.1■□□□□ 0.01
Ddx49Q4FZF3 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx49Q4FZF3 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC15.1■□□□□ 0.01
Ddx49Q4FZF3 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx49Q4FZF3 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ddx49Q4FZF3 Gm5523-201ENSMUST00000180415 997 ntBASIC15.1■□□□□ 0.01
Ddx49Q4FZF3 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx49Q4FZF3 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx49Q4FZF3 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx49Q4FZF3 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx49Q4FZF3 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx49Q4FZF3 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx49Q4FZF3 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx49Q4FZF3 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx49Q4FZF3 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx49Q4FZF3 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx49Q4FZF3 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 108.1 ms