Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.17□□□□□ -0.3
Gabpb1Q00420 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.17□□□□□ -0.3
Gabpb1Q00420 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Gm12490-201ENSMUST00000120255 560 ntBASIC13.17□□□□□ -0.3
Gabpb1Q00420 Gm12291-201ENSMUST00000121627 311 ntBASIC13.17□□□□□ -0.3
Gabpb1Q00420 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Proscos-202ENSMUST00000178990 666 ntBASIC13.17□□□□□ -0.3
Gabpb1Q00420 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Gm7653-201ENSMUST00000214567 508 ntBASIC13.17□□□□□ -0.3
Gabpb1Q00420 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Gm17794-201ENSMUST00000220252 955 ntBASIC13.17□□□□□ -0.3
Gabpb1Q00420 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.17□□□□□ -0.3
Gabpb1Q00420 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.17□□□□□ -0.3
Gabpb1Q00420 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabpb1Q00420 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gabpb1Q00420 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.16□□□□□ -0.3
Gabpb1Q00420 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Mir1894-201ENSMUST00000122802 81 ntBASIC13.16□□□□□ -0.3
Gabpb1Q00420 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Gm37922-201ENSMUST00000195596 455 ntBASIC13.16□□□□□ -0.3
Gabpb1Q00420 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.16□□□□□ -0.3
Gabpb1Q00420 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.15□□□□□ -0.3
Gabpb1Q00420 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gabpb1Q00420 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Gabpb1Q00420 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gabpb1Q00420 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms