Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tpm2P58774 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Tpm2P58774 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tpm2P58774 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tpm2P58774 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Tpm2P58774 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Tpm2P58774 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tpm2P58774 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Tpm2P58774 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
Tpm2P58774 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm2P58774 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Tpm2P58774 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.92□□□□□ -0.02
Tpm2P58774 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm2P58774 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm2P58774 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.92□□□□□ -0.02
Tpm2P58774 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm2P58774 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.92□□□□□ -0.02
Tpm2P58774 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm2P58774 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Tpm2P58774 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC14.92□□□□□ -0.02
Tpm2P58774 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm2P58774 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Tpm2P58774 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm2P58774 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm2P58774 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.92□□□□□ -0.02
Tpm2P58774 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Tpm2P58774 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm2P58774 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.92□□□□□ -0.02
Tpm2P58774 Chchd1-203ENSMUST00000224633 557 ntBASIC14.92□□□□□ -0.02
Tpm2P58774 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm2P58774 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.92□□□□□ -0.02
Tpm2P58774 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm2P58774 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm2P58774 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm2P58774 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm2P58774 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm2P58774 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm2P58774 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Tpm2P58774 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm2P58774 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Tpm2P58774 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm2P58774 AC124577.2-201ENSMUST00000217413 2420 ntBASIC14.92□□□□□ -0.02
Tpm2P58774 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.92□□□□□ -0.02
Tpm2P58774 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm2P58774 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm2P58774 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm2P58774 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm2P58774 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm2P58774 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm2P58774 Gm38376-201ENSMUST00000195493 2253 ntBASIC14.91□□□□□ -0.02
Tpm2P58774 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm2P58774 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.91□□□□□ -0.02
Tpm2P58774 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm2P58774 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm2P58774 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm2P58774 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.91□□□□□ -0.02
Tpm2P58774 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm2P58774 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm2P58774 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Tpm2P58774 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm2P58774 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm2P58774 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm2P58774 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.91□□□□□ -0.02
Tpm2P58774 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Tpm2P58774 Gm10766-202ENSMUST00000194123 606 ntBASIC14.91□□□□□ -0.02
Tpm2P58774 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.91□□□□□ -0.02
Tpm2P58774 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm2P58774 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm2P58774 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm2P58774 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Tpm2P58774 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Tpm2P58774 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm2P58774 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm2P58774 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm2P58774 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm2P58774 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm2P58774 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm2P58774 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm2P58774 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm2P58774 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Tpm2P58774 CT573086.2-201ENSMUST00000227277 4992 ntBASIC14.91□□□□□ -0.02
Tpm2P58774 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm2P58774 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm2P58774 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Tpm2P58774 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm2P58774 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm2P58774 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm2P58774 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.9□□□□□ -0.02
Tpm2P58774 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm2P58774 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.9□□□□□ -0.02
Tpm2P58774 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm2P58774 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm2P58774 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm2P58774 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Tpm2P58774 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm2P58774 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.9□□□□□ -0.02
Tpm2P58774 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm2P58774 Gm3436-201ENSMUST00000179930 840 ntBASIC14.9□□□□□ -0.02
Tpm2P58774 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.9□□□□□ -0.02
Tpm2P58774 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms