Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NrlP54846 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.81□□□□□ -0.2
NrlP54846 Gm11978-201ENSMUST00000122315 466 ntBASIC13.81□□□□□ -0.2
NrlP54846 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.81□□□□□ -0.2
NrlP54846 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.81□□□□□ -0.2
NrlP54846 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.81□□□□□ -0.2
NrlP54846 Gm6458-201ENSMUST00000211573 635 ntBASIC13.81□□□□□ -0.2
NrlP54846 Gm5363-201ENSMUST00000211927 938 ntBASIC13.81□□□□□ -0.2
NrlP54846 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.81□□□□□ -0.2
NrlP54846 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NrlP54846 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NrlP54846 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NrlP54846 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
NrlP54846 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NrlP54846 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NrlP54846 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NrlP54846 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NrlP54846 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.81□□□□□ -0.2
NrlP54846 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NrlP54846 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NrlP54846 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NrlP54846 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NrlP54846 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NrlP54846 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NrlP54846 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
NrlP54846 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.8□□□□□ -0.2
NrlP54846 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.8□□□□□ -0.2
NrlP54846 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
NrlP54846 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
NrlP54846 Gm14726-201ENSMUST00000120623 896 ntBASIC13.8□□□□□ -0.2
NrlP54846 Gm13316-201ENSMUST00000140537 691 ntBASIC13.8□□□□□ -0.2
NrlP54846 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.8□□□□□ -0.2
NrlP54846 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Gm18753-201ENSMUST00000201000 566 ntBASIC13.8□□□□□ -0.2
NrlP54846 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.8□□□□□ -0.2
NrlP54846 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.8□□□□□ -0.2
NrlP54846 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
NrlP54846 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
NrlP54846 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
NrlP54846 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.8□□□□□ -0.2
NrlP54846 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NrlP54846 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
NrlP54846 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
NrlP54846 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NrlP54846 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NrlP54846 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NrlP54846 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NrlP54846 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NrlP54846 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NrlP54846 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NrlP54846 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NrlP54846 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NrlP54846 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NrlP54846 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.79□□□□□ -0.2
NrlP54846 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NrlP54846 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NrlP54846 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NrlP54846 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.79□□□□□ -0.2
NrlP54846 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NrlP54846 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NrlP54846 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
NrlP54846 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NrlP54846 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NrlP54846 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NrlP54846 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NrlP54846 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NrlP54846 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NrlP54846 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NrlP54846 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NrlP54846 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms