Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf9P41274 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf9P41274 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Tnfsf9P41274 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf9P41274 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf9P41274 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf9P41274 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.42□□□□□ -0.42
Tnfsf9P41274 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.42□□□□□ -0.42
Tnfsf9P41274 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Tnfsf9P41274 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf9P41274 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf9P41274 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf9P41274 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf9P41274 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf9P41274 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf9P41274 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.42□□□□□ -0.42
Tnfsf9P41274 Mir1247-201ENSMUST00000116706 82 ntBASIC12.42□□□□□ -0.42
Tnfsf9P41274 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.42□□□□□ -0.42
Tnfsf9P41274 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
Tnfsf9P41274 Gm6222-202ENSMUST00000182143 629 ntBASIC12.42□□□□□ -0.42
Tnfsf9P41274 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.42□□□□□ -0.42
Tnfsf9P41274 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Tnfsf9P41274 Gm43118-201ENSMUST00000199149 775 ntBASIC12.42□□□□□ -0.42
Tnfsf9P41274 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.42□□□□□ -0.42
Tnfsf9P41274 Gm18584-201ENSMUST00000203098 964 ntBASIC12.42□□□□□ -0.42
Tnfsf9P41274 Gm18935-201ENSMUST00000212692 664 ntBASIC12.42□□□□□ -0.42
Tnfsf9P41274 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.42□□□□□ -0.42
Tnfsf9P41274 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf9P41274 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf9P41274 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf9P41274 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf9P41274 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf9P41274 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf9P41274 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf9P41274 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.42□□□□□ -0.42
Tnfsf9P41274 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf9P41274 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.42□□□□□ -0.42
Tnfsf9P41274 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf9P41274 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf9P41274 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Tnfsf9P41274 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf9P41274 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf9P41274 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf9P41274 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Gm11793-201ENSMUST00000120433 981 ntBASIC12.41□□□□□ -0.42
Tnfsf9P41274 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Gm7809-201ENSMUST00000153199 742 ntBASIC12.41□□□□□ -0.42
Tnfsf9P41274 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.41□□□□□ -0.42
Tnfsf9P41274 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.41□□□□□ -0.42
Tnfsf9P41274 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.41□□□□□ -0.42
Tnfsf9P41274 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf9P41274 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf9P41274 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf9P41274 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf9P41274 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf9P41274 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf9P41274 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Tnfsf9P41274 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf9P41274 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf9P41274 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf9P41274 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms