Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cbx3P23198 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.81□□□□□ -0.52
Cbx3P23198 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cbx3P23198 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cbx3P23198 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cbx3P23198 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cbx3P23198 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cbx3P23198 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cbx3P23198 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cbx3P23198 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cbx3P23198 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cbx3P23198 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cbx3P23198 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cbx3P23198 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cbx3P23198 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cbx3P23198 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
Cbx3P23198 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cbx3P23198 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cbx3P23198 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Cbx3P23198 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.8□□□□□ -0.52
Cbx3P23198 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cbx3P23198 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.8□□□□□ -0.52
Cbx3P23198 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cbx3P23198 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cbx3P23198 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cbx3P23198 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.8□□□□□ -0.52
Cbx3P23198 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC11.8□□□□□ -0.52
Cbx3P23198 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cbx3P23198 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cbx3P23198 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.8□□□□□ -0.52
Cbx3P23198 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.8□□□□□ -0.52
Cbx3P23198 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC11.8□□□□□ -0.52
Cbx3P23198 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cbx3P23198 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cbx3P23198 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cbx3P23198 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cbx3P23198 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cbx3P23198 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cbx3P23198 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cbx3P23198 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cbx3P23198 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cbx3P23198 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cbx3P23198 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cbx3P23198 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cbx3P23198 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.8□□□□□ -0.52
Cbx3P23198 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cbx3P23198 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cbx3P23198 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cbx3P23198 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cbx3P23198 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cbx3P23198 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cbx3P23198 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cbx3P23198 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cbx3P23198 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.79□□□□□ -0.52
Cbx3P23198 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cbx3P23198 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cbx3P23198 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cbx3P23198 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.79□□□□□ -0.52
Cbx3P23198 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cbx3P23198 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cbx3P23198 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.79□□□□□ -0.52
Cbx3P23198 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cbx3P23198 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cbx3P23198 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cbx3P23198 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.79□□□□□ -0.52
Cbx3P23198 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cbx3P23198 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cbx3P23198 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cbx3P23198 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC11.79□□□□□ -0.52
Cbx3P23198 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cbx3P23198 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC11.79□□□□□ -0.52
Cbx3P23198 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC11.79□□□□□ -0.52
Cbx3P23198 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.79□□□□□ -0.52
Cbx3P23198 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cbx3P23198 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cbx3P23198 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cbx3P23198 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cbx3P23198 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.79□□□□□ -0.52
Cbx3P23198 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.79□□□□□ -0.52
Cbx3P23198 Gm37230-201ENSMUST00000194491 818 ntBASIC11.79□□□□□ -0.52
Cbx3P23198 Gm45747-201ENSMUST00000212203 999 ntBASIC11.79□□□□□ -0.52
Cbx3P23198 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cbx3P23198 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cbx3P23198 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cbx3P23198 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cbx3P23198 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cbx3P23198 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cbx3P23198 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cbx3P23198 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Cbx3P23198 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cbx3P23198 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cbx3P23198 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cbx3P23198 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cbx3P23198 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cbx3P23198 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cbx3P23198 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cbx3P23198 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cbx3P23198 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cbx3P23198 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cbx3P23198 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms