Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Itgb3O54890 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Itgb3O54890 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Itgb3O54890 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Itgb3O54890 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Itgb3O54890 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Itgb3O54890 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Itgb3O54890 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Itgb3O54890 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Itgb3O54890 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Itgb3O54890 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Itgb3O54890 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Itgb3O54890 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Itgb3O54890 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Itgb3O54890 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Itgb3O54890 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Itgb3O54890 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Itgb3O54890 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Itgb3O54890 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Itgb3O54890 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Itgb3O54890 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Itgb3O54890 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Itgb3O54890 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Itgb3O54890 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Itgb3O54890 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.74□□□□□ -0.21
Itgb3O54890 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.74□□□□□ -0.21
Itgb3O54890 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Itgb3O54890 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.74□□□□□ -0.21
Itgb3O54890 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Itgb3O54890 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.74□□□□□ -0.21
Itgb3O54890 Gm18584-201ENSMUST00000203098 964 ntBASIC13.74□□□□□ -0.21
Itgb3O54890 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.74□□□□□ -0.21
Itgb3O54890 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Itgb3O54890 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.74□□□□□ -0.21
Itgb3O54890 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Itgb3O54890 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Itgb3O54890 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Itgb3O54890 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Itgb3O54890 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Itgb3O54890 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Itgb3O54890 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Itgb3O54890 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Itgb3O54890 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Itgb3O54890 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Itgb3O54890 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Itgb3O54890 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.74□□□□□ -0.21
Itgb3O54890 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Itgb3O54890 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Itgb3O54890 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Itgb3O54890 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Itgb3O54890 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Itgb3O54890 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Itgb3O54890 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Itgb3O54890 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.73□□□□□ -0.21
Itgb3O54890 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Itgb3O54890 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Itgb3O54890 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Itgb3O54890 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Itgb3O54890 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Itgb3O54890 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Itgb3O54890 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.73□□□□□ -0.21
Itgb3O54890 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.73□□□□□ -0.21
Itgb3O54890 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.73□□□□□ -0.21
Itgb3O54890 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Itgb3O54890 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Itgb3O54890 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Itgb3O54890 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.73□□□□□ -0.21
Itgb3O54890 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Itgb3O54890 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Itgb3O54890 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Itgb3O54890 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Itgb3O54890 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Itgb3O54890 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.73□□□□□ -0.21
Itgb3O54890 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Itgb3O54890 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Itgb3O54890 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Itgb3O54890 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Itgb3O54890 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Itgb3O54890 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Itgb3O54890 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Itgb3O54890 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Itgb3O54890 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Itgb3O54890 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Itgb3O54890 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.72□□□□□ -0.21
Itgb3O54890 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Itgb3O54890 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Itgb3O54890 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Itgb3O54890 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Itgb3O54890 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Itgb3O54890 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Itgb3O54890 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Itgb3O54890 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Itgb3O54890 Gm6023-201ENSMUST00000118217 606 ntBASIC13.72□□□□□ -0.21
Itgb3O54890 Gm11793-201ENSMUST00000120433 981 ntBASIC13.72□□□□□ -0.21
Itgb3O54890 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Itgb3O54890 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Itgb3O54890 Gm8099-201ENSMUST00000200510 742 ntBASIC13.72□□□□□ -0.21
Itgb3O54890 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Itgb3O54890 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.72□□□□□ -0.21
Itgb3O54890 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms