Protein–RNA interactions for Protein: O54798

Brs3, Bombesin receptor subtype-3, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brs3O54798 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Brs3O54798 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Brs3O54798 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Brs3O54798 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Brs3O54798 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Brs3O54798 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Brs3O54798 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Brs3O54798 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Brs3O54798 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Brs3O54798 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.76□□□□□ -0.69
Brs3O54798 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.76□□□□□ -0.69
Brs3O54798 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Brs3O54798 Snora78-201ENSMUST00000158630 128 ntBASIC10.76□□□□□ -0.69
Brs3O54798 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.76□□□□□ -0.69
Brs3O54798 Gm29127-201ENSMUST00000188304 517 ntBASIC10.76□□□□□ -0.69
Brs3O54798 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.76□□□□□ -0.69
Brs3O54798 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.76□□□□□ -0.69
Brs3O54798 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Brs3O54798 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC10.76□□□□□ -0.69
Brs3O54798 Gm8598-201ENSMUST00000221184 836 ntBASIC10.76□□□□□ -0.69
Brs3O54798 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.76□□□□□ -0.69
Brs3O54798 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Brs3O54798 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Brs3O54798 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Brs3O54798 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Brs3O54798 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Brs3O54798 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Brs3O54798 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.76□□□□□ -0.69
Brs3O54798 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Brs3O54798 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Brs3O54798 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Brs3O54798 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.76□□□□□ -0.69
Brs3O54798 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Brs3O54798 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Brs3O54798 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Brs3O54798 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Brs3O54798 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.76□□□□□ -0.69
Brs3O54798 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Brs3O54798 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.76□□□□□ -0.69
Brs3O54798 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.76□□□□□ -0.69
Brs3O54798 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Brs3O54798 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Brs3O54798 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Brs3O54798 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Brs3O54798 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.75□□□□□ -0.69
Brs3O54798 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.75□□□□□ -0.69
Brs3O54798 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Brs3O54798 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Brs3O54798 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Brs3O54798 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Brs3O54798 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC10.75□□□□□ -0.69
Brs3O54798 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Brs3O54798 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC10.75□□□□□ -0.69
Brs3O54798 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Brs3O54798 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Brs3O54798 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Brs3O54798 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC10.75□□□□□ -0.69
Brs3O54798 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC10.75□□□□□ -0.69
Brs3O54798 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Brs3O54798 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Brs3O54798 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Brs3O54798 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Brs3O54798 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC10.75□□□□□ -0.69
Brs3O54798 Gm12203-201ENSMUST00000118235 598 ntBASIC10.75□□□□□ -0.69
Brs3O54798 Gm12209-201ENSMUST00000120089 596 ntBASIC10.75□□□□□ -0.69
Brs3O54798 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.75□□□□□ -0.69
Brs3O54798 Mir7085-201ENSMUST00000184353 66 ntBASIC10.75□□□□□ -0.69
Brs3O54798 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.75□□□□□ -0.69
Brs3O54798 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.75□□□□□ -0.69
Brs3O54798 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.75□□□□□ -0.69
Brs3O54798 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Brs3O54798 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Brs3O54798 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.75□□□□□ -0.69
Brs3O54798 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Brs3O54798 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Brs3O54798 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.75□□□□□ -0.69
Brs3O54798 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Brs3O54798 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Brs3O54798 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
Brs3O54798 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Brs3O54798 Pck2-205ENSMUST00000226352 2784 ntBASIC10.75□□□□□ -0.69
Brs3O54798 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Brs3O54798 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Brs3O54798 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Brs3O54798 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Brs3O54798 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Brs3O54798 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Brs3O54798 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Brs3O54798 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Brs3O54798 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Brs3O54798 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Brs3O54798 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Brs3O54798 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Brs3O54798 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Brs3O54798 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.74□□□□□ -0.69
Brs3O54798 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Brs3O54798 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Brs3O54798 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Brs3O54798 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Brs3O54798 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms