Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-4Q9EQM3 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-4Q9EQM3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Nkx2-4Q9EQM3 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-4Q9EQM3 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-4Q9EQM3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-4Q9EQM3 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Nkx2-4Q9EQM3 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-4Q9EQM3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-4Q9EQM3 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-4Q9EQM3 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-4Q9EQM3 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-4Q9EQM3 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-4Q9EQM3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-4Q9EQM3 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-4Q9EQM3 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.27□□□□□ -0.28
Nkx2-4Q9EQM3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-4Q9EQM3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-4Q9EQM3 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Gm10752-201ENSMUST00000218348 729 ntBASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-4Q9EQM3 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Gm12380-201ENSMUST00000119012 544 ntBASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Gm12029-201ENSMUST00000120073 832 ntBASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Gm11450-201ENSMUST00000121144 333 ntBASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Gm6407-201ENSMUST00000176468 549 ntBASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Gm45598-202ENSMUST00000210719 986 ntBASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 CT025551.1-201ENSMUST00000223996 692 ntBASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.26□□□□□ -0.29
Nkx2-4Q9EQM3 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms