Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm8396-201ENSMUST00000057361 823 ntBASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ssu72Q9CY97 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Gm21854-201ENSMUST00000179901 471 ntBASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Gm26035-201ENSMUST00000083065 308 ntBASIC12.89□□□□□ -0.35
Ssu72Q9CY97 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.89□□□□□ -0.35
Ssu72Q9CY97 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Gm27397-201ENSMUST00000184997 107 ntBASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Gm42550-201ENSMUST00000201553 960 ntBASIC12.88□□□□□ -0.35
Ssu72Q9CY97 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ssu72Q9CY97 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms