Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Mir1247-201ENSMUST00000116706 82 ntBASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Gm3890-201ENSMUST00000182416 207 ntBASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lsm7Q9CQQ8 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Gm14704-201ENSMUST00000120300 874 ntBASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Gm22121-201ENSMUST00000175148 54 ntBASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Gm27501-201ENSMUST00000183599 107 ntBASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Gm29396-201ENSMUST00000185659 716 ntBASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Gm3961-201ENSMUST00000204425 994 ntBASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lsm7Q9CQQ8 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm7Q9CQQ8 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm7Q9CQQ8 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Lsm7Q9CQQ8 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm7Q9CQQ8 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm7Q9CQQ8 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm7Q9CQQ8 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Lsm7Q9CQQ8 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm7Q9CQQ8 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Lsm7Q9CQQ8 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm7Q9CQQ8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Lsm7Q9CQQ8 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lsm7Q9CQQ8 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.09□□□□□ -0.31
Lsm7Q9CQQ8 Gm12241-201ENSMUST00000118330 726 ntBASIC13.09□□□□□ -0.31
Lsm7Q9CQQ8 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.09□□□□□ -0.31
Lsm7Q9CQQ8 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.09□□□□□ -0.31
Lsm7Q9CQQ8 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms