Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx6-1Q99MA9 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Gm23200-201ENSMUST00000104379 132 ntBASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx6-1Q99MA9 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Gm13875-201ENSMUST00000120162 282 ntBASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx6-1Q99MA9 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms