Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb18Q91Y02 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdhb18Q91Y02 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhb18Q91Y02 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb18Q91Y02 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb18Q91Y02 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.61□□□□□ -0.23
Pcdhb18Q91Y02 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.61□□□□□ -0.23
Pcdhb18Q91Y02 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhb18Q91Y02 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.61□□□□□ -0.23
Pcdhb18Q91Y02 Gm5781-201ENSMUST00000219792 443 ntBASIC13.61□□□□□ -0.23
Pcdhb18Q91Y02 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb18Q91Y02 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdhb18Q91Y02 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb18Q91Y02 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb18Q91Y02 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb18Q91Y02 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb18Q91Y02 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb18Q91Y02 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb18Q91Y02 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb18Q91Y02 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb18Q91Y02 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb18Q91Y02 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb18Q91Y02 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 Gm22323-201ENSMUST00000103832 109 ntBASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 Gm16570-201ENSMUST00000161951 436 ntBASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb18Q91Y02 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Gm17208-201ENSMUST00000168388 535 ntBASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Gm20482-202ENSMUST00000174729 825 ntBASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Gm18827-201ENSMUST00000188341 790 ntBASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Gm37466-201ENSMUST00000195692 652 ntBASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb18Q91Y02 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.23
Pcdhb18Q91Y02 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb18Q91Y02 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb18Q91Y02 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb18Q91Y02 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb18Q91Y02 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Pcdhb18Q91Y02 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms