Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Gm15824-201ENSMUST00000119516 955 ntBASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Gm8810-201ENSMUST00000172895 754 ntBASIC13.29□□□□□ -0.28
Sfr1Q8BP27 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Gm7561-201ENSMUST00000211203 886 ntBASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.29□□□□□ -0.28
Sfr1Q8BP27 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Gm11618-201ENSMUST00000117946 267 ntBASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Gm24644-201ENSMUST00000157114 139 ntBASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Gm22331-201ENSMUST00000158066 136 ntBASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.28□□□□□ -0.28
Sfr1Q8BP27 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.28□□□□□ -0.28
Sfr1Q8BP27 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Gm6091-201ENSMUST00000098307 165 ntBASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sfr1Q8BP27 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms