Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf40bQ80W14 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf40bQ80W14 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf40bQ80W14 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf40bQ80W14 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf40bQ80W14 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf40bQ80W14 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf40bQ80W14 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf40bQ80W14 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Prpf40bQ80W14 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf40bQ80W14 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.02□□□□□ -0.01
Prpf40bQ80W14 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Prpf40bQ80W14 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.02□□□□□ -0.01
Prpf40bQ80W14 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.02□□□□□ -0.01
Prpf40bQ80W14 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC15.01□□□□□ -0.01
Prpf40bQ80W14 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40bQ80W14 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15□□□□□ -0.01
Prpf40bQ80W14 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Prpf40bQ80W14 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40bQ80W14 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prpf40bQ80W14 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15□□□□□ -0.01
Prpf40bQ80W14 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Prpf40bQ80W14 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40bQ80W14 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15□□□□□ -0.01
Prpf40bQ80W14 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40bQ80W14 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Prpf40bQ80W14 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Prpf40bQ80W14 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40bQ80W14 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prpf40bQ80W14 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40bQ80W14 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Prpf40bQ80W14 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40bQ80W14 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prpf40bQ80W14 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC15□□□□□ -0.01
Prpf40bQ80W14 AU022133-201ENSMUST00000200601 873 ntBASIC15□□□□□ -0.01
Prpf40bQ80W14 Gm43947-201ENSMUST00000203019 959 ntBASIC15□□□□□ -0.01
Prpf40bQ80W14 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prpf40bQ80W14 Gm45186-201ENSMUST00000206874 478 ntBASIC15□□□□□ -0.01
Prpf40bQ80W14 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15□□□□□ -0.01
Prpf40bQ80W14 AC154532.1-201ENSMUST00000227860 965 ntBASIC15□□□□□ -0.01
Prpf40bQ80W14 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Prpf40bQ80W14 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prpf40bQ80W14 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Prpf40bQ80W14 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40bQ80W14 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prpf40bQ80W14 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40bQ80W14 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40bQ80W14 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40bQ80W14 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40bQ80W14 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40bQ80W14 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40bQ80W14 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40bQ80W14 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40bQ80W14 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40bQ80W14 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40bQ80W14 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40bQ80W14 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40bQ80W14 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Prpf40bQ80W14 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms