Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col11a1Q61245 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col11a1Q61245 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col11a1Q61245 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col11a1Q61245 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col11a1Q61245 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Col11a1Q61245 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col11a1Q61245 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col11a1Q61245 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col11a1Q61245 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col11a1Q61245 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col11a1Q61245 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col11a1Q61245 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
Col11a1Q61245 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col11a1Q61245 Mir7677-201ENSMUST00000184226 67 ntBASIC14.24□□□□□ -0.13
Col11a1Q61245 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col11a1Q61245 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC14.24□□□□□ -0.13
Col11a1Q61245 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC14.24□□□□□ -0.13
Col11a1Q61245 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC14.24□□□□□ -0.13
Col11a1Q61245 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col11a1Q61245 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC14.24□□□□□ -0.13
Col11a1Q61245 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Col11a1Q61245 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col11a1Q61245 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.24□□□□□ -0.13
Col11a1Q61245 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col11a1Q61245 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col11a1Q61245 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Col11a1Q61245 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col11a1Q61245 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col11a1Q61245 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col11a1Q61245 Gm12816-201ENSMUST00000118069 1212 ntBASIC14.23□□□□□ -0.13
Col11a1Q61245 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC14.23□□□□□ -0.13
Col11a1Q61245 Gm29155-201ENSMUST00000185910 269 ntBASIC14.23□□□□□ -0.13
Col11a1Q61245 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col11a1Q61245 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Col11a1Q61245 Gm5879-201ENSMUST00000089501 1209 ntBASIC14.23□□□□□ -0.13
Col11a1Q61245 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.23□□□□□ -0.13
Col11a1Q61245 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col11a1Q61245 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col11a1Q61245 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col11a1Q61245 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col11a1Q61245 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.23□□□□□ -0.13
Col11a1Q61245 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col11a1Q61245 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col11a1Q61245 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col11a1Q61245 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.23□□□□□ -0.13
Col11a1Q61245 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.23□□□□□ -0.13
Col11a1Q61245 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col11a1Q61245 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col11a1Q61245 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col11a1Q61245 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col11a1Q61245 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a1Q61245 Gm12857-201ENSMUST00000117678 592 ntBASIC14.22□□□□□ -0.13
Col11a1Q61245 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Col11a1Q61245 Gm8100-201ENSMUST00000182906 988 ntBASIC14.22□□□□□ -0.13
Col11a1Q61245 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a1Q61245 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a1Q61245 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC14.22□□□□□ -0.13
Col11a1Q61245 AC154176.1-201ENSMUST00000225897 220 ntBASIC14.22□□□□□ -0.13
Col11a1Q61245 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Col11a1Q61245 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a1Q61245 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a1Q61245 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.22□□□□□ -0.13
Col11a1Q61245 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a1Q61245 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a1Q61245 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a1Q61245 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.22□□□□□ -0.13
Col11a1Q61245 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a1Q61245 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a1Q61245 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a1Q61245 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Col11a1Q61245 Gm25880-201ENSMUST00000104331 132 ntBASIC14.22□□□□□ -0.13
Col11a1Q61245 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC14.22□□□□□ -0.13
Col11a1Q61245 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC14.22□□□□□ -0.13
Col11a1Q61245 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC14.22□□□□□ -0.13
Col11a1Q61245 Gm4157-201ENSMUST00000211647 679 ntBASIC14.22□□□□□ -0.13
Col11a1Q61245 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a1Q61245 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.22□□□□□ -0.13
Col11a1Q61245 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a1Q61245 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Col11a1Q61245 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.22□□□□□ -0.13
Col11a1Q61245 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Col11a1Q61245 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a1Q61245 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.22□□□□□ -0.13
Col11a1Q61245 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col11a1Q61245 Gm3765-201ENSMUST00000130985 1447 ntBASIC14.21□□□□□ -0.13
Col11a1Q61245 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.21□□□□□ -0.13
Col11a1Q61245 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.21□□□□□ -0.13
Col11a1Q61245 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a1Q61245 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a1Q61245 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a1Q61245 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.21□□□□□ -0.13
Col11a1Q61245 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a1Q61245 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a1Q61245 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a1Q61245 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a1Q61245 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a1Q61245 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Col11a1Q61245 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC14.21□□□□□ -0.13
Col11a1Q61245 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms