Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Gm15240-201ENSMUST00000118156 720 ntBASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptchd3Q0EEE2 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Syt7-204ENSMUST00000223586 1344 ntBASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ptchd3Q0EEE2 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptchd3Q0EEE2 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms