Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox5P35710 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox5P35710 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox5P35710 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.19□□□□□ -0.14
Sox5P35710 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox5P35710 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.19□□□□□ -0.14
Sox5P35710 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox5P35710 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox5P35710 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.19□□□□□ -0.14
Sox5P35710 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox5P35710 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox5P35710 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox5P35710 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox5P35710 Rubie-203ENSMUST00000227803 2430 ntBASIC14.19□□□□□ -0.14
Sox5P35710 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox5P35710 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Sox5P35710 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.18□□□□□ -0.14
Sox5P35710 Syt7-204ENSMUST00000223586 1344 ntBASIC14.18□□□□□ -0.14
Sox5P35710 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox5P35710 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox5P35710 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Sox5P35710 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sox5P35710 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox5P35710 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox5P35710 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Sox5P35710 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox5P35710 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox5P35710 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sox5P35710 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.18□□□□□ -0.14
Sox5P35710 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox5P35710 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox5P35710 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sox5P35710 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
Sox5P35710 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox5P35710 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox5P35710 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.18□□□□□ -0.14
Sox5P35710 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.18□□□□□ -0.14
Sox5P35710 Gm42612-201ENSMUST00000197986 623 ntBASIC14.18□□□□□ -0.14
Sox5P35710 Gm43170-201ENSMUST00000199827 612 ntBASIC14.18□□□□□ -0.14
Sox5P35710 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.18□□□□□ -0.14
Sox5P35710 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox5P35710 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox5P35710 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox5P35710 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.18□□□□□ -0.14
Sox5P35710 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Sox5P35710 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox5P35710 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox5P35710 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox5P35710 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox5P35710 Pck2-205ENSMUST00000226352 2784 ntBASIC14.17□□□□□ -0.14
Sox5P35710 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox5P35710 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox5P35710 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox5P35710 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox5P35710 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox5P35710 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox5P35710 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox5P35710 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox5P35710 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sox5P35710 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.17□□□□□ -0.14
Sox5P35710 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.17□□□□□ -0.14
Sox5P35710 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox5P35710 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox5P35710 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.17□□□□□ -0.14
Sox5P35710 Matn2-203ENSMUST00000226766 3252 ntBASIC14.17□□□□□ -0.14
Sox5P35710 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox5P35710 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox5P35710 Mir686-201ENSMUST00000102174 109 ntBASIC14.17□□□□□ -0.14
Sox5P35710 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox5P35710 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.17□□□□□ -0.14
Sox5P35710 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.17□□□□□ -0.14
Sox5P35710 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Sox5P35710 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.17□□□□□ -0.14
Sox5P35710 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox5P35710 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.17□□□□□ -0.14
Sox5P35710 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.17□□□□□ -0.14
Sox5P35710 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox5P35710 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.17□□□□□ -0.14
Sox5P35710 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox5P35710 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox5P35710 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Sox5P35710 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox5P35710 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox5P35710 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox5P35710 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox5P35710 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox5P35710 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox5P35710 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox5P35710 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox5P35710 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox5P35710 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox5P35710 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Sox5P35710 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox5P35710 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox5P35710 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox5P35710 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox5P35710 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox5P35710 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox5P35710 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox5P35710 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms