Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc6P10629 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc6P10629 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc6P10629 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc6P10629 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc6P10629 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hoxc6P10629 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc6P10629 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc6P10629 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc6P10629 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hoxc6P10629 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.36□□□□□ -0.11
Hoxc6P10629 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc6P10629 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc6P10629 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Hoxc6P10629 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hoxc6P10629 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc6P10629 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc6P10629 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc6P10629 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc6P10629 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc6P10629 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc6P10629 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc6P10629 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.36□□□□□ -0.11
Hoxc6P10629 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc6P10629 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc6P10629 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc6P10629 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc6P10629 Gm23200-201ENSMUST00000104379 132 ntBASIC14.36□□□□□ -0.11
Hoxc6P10629 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.36□□□□□ -0.11
Hoxc6P10629 Gm12291-201ENSMUST00000121627 311 ntBASIC14.36□□□□□ -0.11
Hoxc6P10629 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc6P10629 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.36□□□□□ -0.11
Hoxc6P10629 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.36□□□□□ -0.11
Hoxc6P10629 Gm8959-201ENSMUST00000213150 571 ntBASIC14.36□□□□□ -0.11
Hoxc6P10629 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc6P10629 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hoxc6P10629 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc6P10629 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hoxc6P10629 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc6P10629 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc6P10629 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc6P10629 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc6P10629 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc6P10629 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc6P10629 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hoxc6P10629 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc6P10629 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.36□□□□□ -0.11
Hoxc6P10629 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc6P10629 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc6P10629 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.36□□□□□ -0.11
Hoxc6P10629 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc6P10629 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hoxc6P10629 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc6P10629 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc6P10629 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc6P10629 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc6P10629 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc6P10629 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc6P10629 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc6P10629 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc6P10629 Gm14921-201ENSMUST00000118643 908 ntBASIC14.35□□□□□ -0.11
Hoxc6P10629 Gm44651-201ENSMUST00000207343 372 ntBASIC14.35□□□□□ -0.11
Hoxc6P10629 Gm29787-201ENSMUST00000222129 849 ntBASIC14.35□□□□□ -0.11
Hoxc6P10629 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.35□□□□□ -0.11
Hoxc6P10629 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc6P10629 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc6P10629 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc6P10629 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.35□□□□□ -0.11
Hoxc6P10629 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc6P10629 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.35□□□□□ -0.11
Hoxc6P10629 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.35□□□□□ -0.11
Hoxc6P10629 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc6P10629 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hoxc6P10629 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc6P10629 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hoxc6P10629 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.35□□□□□ -0.11
Hoxc6P10629 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc6P10629 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Hoxc6P10629 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc6P10629 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hoxc6P10629 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Hoxc6P10629 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc6P10629 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc6P10629 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc6P10629 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc6P10629 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hoxc6P10629 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc6P10629 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.34□□□□□ -0.11
Hoxc6P10629 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hoxc6P10629 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc6P10629 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc6P10629 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hoxc6P10629 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hoxc6P10629 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc6P10629 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.34□□□□□ -0.11
Hoxc6P10629 Gm11331-201ENSMUST00000119764 288 ntBASIC14.34□□□□□ -0.11
Hoxc6P10629 Gm27023-201ENSMUST00000182372 285 ntBASIC14.34□□□□□ -0.11
Hoxc6P10629 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc6P10629 Gm37201-201ENSMUST00000191845 523 ntBASIC14.34□□□□□ -0.11
Hoxc6P10629 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms