Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.6□□□□□ -0.55
P06344 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.6□□□□□ -0.55
P06344 Gm6458-201ENSMUST00000211573 635 ntBASIC11.6□□□□□ -0.55
P06344 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.6□□□□□ -0.55
P06344 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.6□□□□□ -0.55
P06344 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
P06344 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P06344 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
P06344 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P06344 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
P06344 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
P06344 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.6□□□□□ -0.55
P06344 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P06344 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P06344 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P06344 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P06344 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
P06344 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
P06344 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
P06344 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P06344 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P06344 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P06344 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P06344 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P06344 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
P06344 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P06344 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
P06344 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
P06344 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
P06344 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P06344 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
P06344 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P06344 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
P06344 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
P06344 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
P06344 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.59□□□□□ -0.55
P06344 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
P06344 Mir686-201ENSMUST00000102174 109 ntBASIC11.59□□□□□ -0.55
P06344 Gm23931-201ENSMUST00000103842 109 ntBASIC11.59□□□□□ -0.55
P06344 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
P06344 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P06344 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P06344 Gm13392-201ENSMUST00000117708 150 ntBASIC11.59□□□□□ -0.55
P06344 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.59□□□□□ -0.55
P06344 Gm17420-201ENSMUST00000164753 153 ntBASIC11.59□□□□□ -0.55
P06344 Mir7221-201ENSMUST00000184009 72 ntBASIC11.59□□□□□ -0.55
P06344 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.59□□□□□ -0.55
P06344 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P06344 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
P06344 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P06344 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P06344 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
P06344 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
P06344 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.59□□□□□ -0.55
P06344 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
P06344 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
P06344 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
P06344 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P06344 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
P06344 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P06344 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.59□□□□□ -0.55
P06344 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
P06344 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
P06344 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
P06344 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P06344 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
P06344 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
P06344 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.58□□□□□ -0.56
P06344 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.58□□□□□ -0.56
P06344 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P06344 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
P06344 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
P06344 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
P06344 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
P06344 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
P06344 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.58□□□□□ -0.56
P06344 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
P06344 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.58□□□□□ -0.56
P06344 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
P06344 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
P06344 Mir1938-201ENSMUST00000158746 100 ntBASIC11.58□□□□□ -0.56
P06344 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
P06344 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
P06344 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.58□□□□□ -0.56
P06344 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
P06344 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.58□□□□□ -0.56
P06344 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P06344 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P06344 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
P06344 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
P06344 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
P06344 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P06344 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
P06344 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
P06344 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P06344 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.58□□□□□ -0.56
P06344 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
P06344 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
P06344 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.58□□□□□ -0.56
P06344 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms