Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC16.54■□□□□ 0.24
Ubr1O70481 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ubr1O70481 Spcs1-203ENSMUST00000226374 592 ntBASIC16.54■□□□□ 0.24
Ubr1O70481 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ubr1O70481 Ntng1-201ENSMUST00000051253 327 ntBASIC16.54■□□□□ 0.24
Ubr1O70481 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC16.54■□□□□ 0.24
Ubr1O70481 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.54■□□□□ 0.24
Ubr1O70481 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC16.54■□□□□ 0.24
Ubr1O70481 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ubr1O70481 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC16.54■□□□□ 0.24
Ubr1O70481 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ubr1O70481 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ubr1O70481 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ubr1O70481 Gm43045-201ENSMUST00000198725 2095 ntBASIC16.54■□□□□ 0.24
Ubr1O70481 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ubr1O70481 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ubr1O70481 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ubr1O70481 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC16.54■□□□□ 0.24
Ubr1O70481 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ubr1O70481 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC16.54■□□□□ 0.24
Ubr1O70481 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ubr1O70481 Aprt-ps-201ENSMUST00000212311 505 ntBASIC16.54■□□□□ 0.24
Ubr1O70481 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ubr1O70481 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ubr1O70481 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ubr1O70481 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ubr1O70481 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC16.53■□□□□ 0.24
Ubr1O70481 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ubr1O70481 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ubr1O70481 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ubr1O70481 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ubr1O70481 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ubr1O70481 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ubr1O70481 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC16.53■□□□□ 0.24
Ubr1O70481 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ubr1O70481 Gm9022-201ENSMUST00000182482 992 ntBASIC16.53■□□□□ 0.24
Ubr1O70481 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC16.53■□□□□ 0.24
Ubr1O70481 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ubr1O70481 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ubr1O70481 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ubr1O70481 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ubr1O70481 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
Ubr1O70481 Gm43081-201ENSMUST00000199082 1380 ntBASIC16.53■□□□□ 0.24
Ubr1O70481 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ubr1O70481 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC16.52■□□□□ 0.24
Ubr1O70481 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ubr1O70481 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ubr1O70481 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ubr1O70481 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ubr1O70481 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ubr1O70481 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC16.52■□□□□ 0.24
Ubr1O70481 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ubr1O70481 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ubr1O70481 Mir6546-201ENSMUST00000184460 62 ntBASIC16.52■□□□□ 0.24
Ubr1O70481 Gm7467-201ENSMUST00000185173 652 ntBASIC16.52■□□□□ 0.24
Ubr1O70481 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC16.52■□□□□ 0.24
Ubr1O70481 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ubr1O70481 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ubr1O70481 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ubr1O70481 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ubr1O70481 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC16.52■□□□□ 0.24
Ubr1O70481 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ubr1O70481 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ubr1O70481 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ubr1O70481 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ubr1O70481 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC16.52■□□□□ 0.23
Ubr1O70481 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ubr1O70481 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ubr1O70481 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.52■□□□□ 0.23
Ubr1O70481 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ubr1O70481 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
Ubr1O70481 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Ubr1O70481 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubr1O70481 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubr1O70481 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ubr1O70481 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC16.51■□□□□ 0.23
Ubr1O70481 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Ubr1O70481 Gm5523-201ENSMUST00000180415 997 ntBASIC16.51■□□□□ 0.23
Ubr1O70481 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ubr1O70481 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC16.51■□□□□ 0.23
Ubr1O70481 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ubr1O70481 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC16.51■□□□□ 0.23
Ubr1O70481 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ubr1O70481 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubr1O70481 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ubr1O70481 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubr1O70481 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubr1O70481 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubr1O70481 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubr1O70481 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ubr1O70481 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubr1O70481 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubr1O70481 AC123619.2-202ENSMUST00000225097 1568 ntBASIC16.51■□□□□ 0.23
Ubr1O70481 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubr1O70481 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ubr1O70481 Gm12196-201ENSMUST00000120954 262 ntBASIC16.51■□□□□ 0.23
Ubr1O70481 Gm14760-201ENSMUST00000121831 999 ntBASIC16.51■□□□□ 0.23
Ubr1O70481 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ubr1O70481 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC16.51■□□□□ 0.23
Ubr1O70481 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms