Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
Tcof1O08784 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tcof1O08784 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Tcof1O08784 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tcof1O08784 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tcof1O08784 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.21■□□□□ 0.03
Tcof1O08784 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
Tcof1O08784 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tcof1O08784 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tcof1O08784 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tcof1O08784 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.02
Tcof1O08784 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.21■□□□□ 0.02
Tcof1O08784 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.21■□□□□ 0.02
Tcof1O08784 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tcof1O08784 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Tcof1O08784 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tcof1O08784 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcof1O08784 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tcof1O08784 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tcof1O08784 Mir874-201ENSMUST00000104769 76 ntBASIC15.2■□□□□ 0.02
Tcof1O08784 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC15.2■□□□□ 0.02
Tcof1O08784 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC15.2■□□□□ 0.02
Tcof1O08784 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.2■□□□□ 0.02
Tcof1O08784 Gm17208-201ENSMUST00000168388 535 ntBASIC15.2■□□□□ 0.02
Tcof1O08784 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tcof1O08784 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.2■□□□□ 0.02
Tcof1O08784 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.2■□□□□ 0.02
Tcof1O08784 Gm4768-201ENSMUST00000206199 686 ntBASIC15.2■□□□□ 0.02
Tcof1O08784 Gm45880-201ENSMUST00000213041 853 ntBASIC15.2■□□□□ 0.02
Tcof1O08784 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcof1O08784 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcof1O08784 n-R5s195-201ENSMUST00000082891 119 ntBASIC15.2■□□□□ 0.02
Tcof1O08784 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC15.2■□□□□ 0.02
Tcof1O08784 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Tcof1O08784 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tcof1O08784 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcof1O08784 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Tcof1O08784 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcof1O08784 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcof1O08784 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcof1O08784 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcof1O08784 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Tcof1O08784 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcof1O08784 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcof1O08784 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.2■□□□□ 0.02
Tcof1O08784 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcof1O08784 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcof1O08784 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcof1O08784 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcof1O08784 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tcof1O08784 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcof1O08784 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcof1O08784 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcof1O08784 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcof1O08784 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC15.2■□□□□ 0.02
Tcof1O08784 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Tcof1O08784 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Tcof1O08784 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcof1O08784 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Tcof1O08784 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Tcof1O08784 Gm43579-201ENSMUST00000202387 1307 ntBASIC15.19■□□□□ 0.02
Tcof1O08784 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC15.19■□□□□ 0.02
Tcof1O08784 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.19■□□□□ 0.02
Tcof1O08784 Gm11658-201ENSMUST00000120913 1008 ntBASIC15.19■□□□□ 0.02
Tcof1O08784 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC15.19■□□□□ 0.02
Tcof1O08784 Gm22121-201ENSMUST00000175148 54 ntBASIC15.19■□□□□ 0.02
Tcof1O08784 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC15.19■□□□□ 0.02
Tcof1O08784 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Tcof1O08784 Gm2467-201ENSMUST00000182266 1010 ntBASIC15.19■□□□□ 0.02
Tcof1O08784 Gm6981-201ENSMUST00000182467 1008 ntBASIC15.19■□□□□ 0.02
Tcof1O08784 Gm5850-201ENSMUST00000192923 1206 ntBASIC15.19■□□□□ 0.02
Tcof1O08784 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.19■□□□□ 0.02
Tcof1O08784 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tcof1O08784 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tcof1O08784 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tcof1O08784 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tcof1O08784 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.19■□□□□ 0.02
Tcof1O08784 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tcof1O08784 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tcof1O08784 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tcof1O08784 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Tcof1O08784 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tcof1O08784 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tcof1O08784 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Tcof1O08784 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tcof1O08784 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tcof1O08784 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tcof1O08784 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tcof1O08784 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tcof1O08784 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tcof1O08784 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tcof1O08784 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.19■□□□□ 0.02
Tcof1O08784 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tcof1O08784 Gm8793-201ENSMUST00000183069 1303 ntBASIC15.19■□□□□ 0.02
Tcof1O08784 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tcof1O08784 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Tcof1O08784 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tcof1O08784 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tcof1O08784 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.18■□□□□ 0.02
Tcof1O08784 Gm7809-201ENSMUST00000153199 742 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms