Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.56■□□□□ 0.08
Ube4aE9Q735 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4aE9Q735 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.56■□□□□ 0.08
Ube4aE9Q735 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.56■□□□□ 0.08
Ube4aE9Q735 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4aE9Q735 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4aE9Q735 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.55■□□□□ 0.08
Ube4aE9Q735 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4aE9Q735 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4aE9Q735 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4aE9Q735 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Ube4aE9Q735 AC123857.2-201ENSMUST00000225756 1582 ntBASIC15.55■□□□□ 0.08
Ube4aE9Q735 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4aE9Q735 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4aE9Q735 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4aE9Q735 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4aE9Q735 Gm14109-201ENSMUST00000118814 309 ntBASIC15.55■□□□□ 0.08
Ube4aE9Q735 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4aE9Q735 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4aE9Q735 Gm27046-201ENSMUST00000182160 463 ntBASIC15.55■□□□□ 0.08
Ube4aE9Q735 Gm37201-201ENSMUST00000191845 523 ntBASIC15.55■□□□□ 0.08
Ube4aE9Q735 AC138604.1-201ENSMUST00000226969 739 ntBASIC15.55■□□□□ 0.08
Ube4aE9Q735 Mettl6-204ENSMUST00000227595 1027 ntBASIC15.55■□□□□ 0.08
Ube4aE9Q735 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4aE9Q735 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Ube4aE9Q735 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4aE9Q735 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4aE9Q735 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4aE9Q735 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4aE9Q735 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4aE9Q735 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4aE9Q735 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4aE9Q735 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4aE9Q735 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
Ube4aE9Q735 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4aE9Q735 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4aE9Q735 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.54■□□□□ 0.08
Ube4aE9Q735 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4aE9Q735 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4aE9Q735 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4aE9Q735 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4aE9Q735 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4aE9Q735 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4aE9Q735 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Ube4aE9Q735 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Ube4aE9Q735 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.54■□□□□ 0.08
Ube4aE9Q735 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4aE9Q735 Gm13570-201ENSMUST00000140763 309 ntBASIC15.54■□□□□ 0.08
Ube4aE9Q735 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4aE9Q735 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4aE9Q735 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ube4aE9Q735 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4aE9Q735 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4aE9Q735 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC15.54■□□□□ 0.08
Ube4aE9Q735 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4aE9Q735 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ube4aE9Q735 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4aE9Q735 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ube4aE9Q735 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4aE9Q735 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.54■□□□□ 0.08
Ube4aE9Q735 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4aE9Q735 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4aE9Q735 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4aE9Q735 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.54■□□□□ 0.08
Ube4aE9Q735 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4aE9Q735 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4aE9Q735 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.54■□□□□ 0.08
Ube4aE9Q735 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4aE9Q735 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4aE9Q735 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4aE9Q735 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4aE9Q735 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4aE9Q735 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ube4aE9Q735 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ube4aE9Q735 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4aE9Q735 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4aE9Q735 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4aE9Q735 Gm13665-201ENSMUST00000120830 528 ntBASIC15.53■□□□□ 0.08
Ube4aE9Q735 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC15.53■□□□□ 0.08
Ube4aE9Q735 Gm16505-201ENSMUST00000179981 232 ntBASIC15.53■□□□□ 0.08
Ube4aE9Q735 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC15.53■□□□□ 0.08
Ube4aE9Q735 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC15.53■□□□□ 0.08
Ube4aE9Q735 AC165260.3-202ENSMUST00000224550 1031 ntBASIC15.53■□□□□ 0.08
Ube4aE9Q735 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4aE9Q735 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4aE9Q735 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4aE9Q735 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4aE9Q735 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4aE9Q735 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4aE9Q735 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4aE9Q735 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4aE9Q735 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4aE9Q735 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4aE9Q735 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.53■□□□□ 0.08
Ube4aE9Q735 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.53■□□□□ 0.08
Ube4aE9Q735 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4aE9Q735 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4aE9Q735 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ube4aE9Q735 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ube4aE9Q735 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms