Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav18A0A075B656 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.66□□□□□ -0.7
Trav18A0A075B656 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav18A0A075B656 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.66□□□□□ -0.7
Trav18A0A075B656 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.66□□□□□ -0.7
Trav18A0A075B656 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.66□□□□□ -0.7
Trav18A0A075B656 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav18A0A075B656 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.66□□□□□ -0.7
Trav18A0A075B656 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.66□□□□□ -0.7
Trav18A0A075B656 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav18A0A075B656 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.65□□□□□ -0.7
Trav18A0A075B656 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav18A0A075B656 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav18A0A075B656 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.65□□□□□ -0.7
Trav18A0A075B656 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav18A0A075B656 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav18A0A075B656 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav18A0A075B656 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav18A0A075B656 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav18A0A075B656 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.65□□□□□ -0.7
Trav18A0A075B656 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Trav18A0A075B656 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav18A0A075B656 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav18A0A075B656 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav18A0A075B656 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Trav18A0A075B656 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Trav18A0A075B656 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC10.65□□□□□ -0.7
Trav18A0A075B656 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav18A0A075B656 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC10.65□□□□□ -0.7
Trav18A0A075B656 Gm38223-201ENSMUST00000194484 695 ntBASIC10.65□□□□□ -0.7
Trav18A0A075B656 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav18A0A075B656 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Trav18A0A075B656 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Trav18A0A075B656 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.65□□□□□ -0.7
Trav18A0A075B656 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.65□□□□□ -0.7
Trav18A0A075B656 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.65□□□□□ -0.7
Trav18A0A075B656 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav18A0A075B656 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav18A0A075B656 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav18A0A075B656 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav18A0A075B656 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav18A0A075B656 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Trav18A0A075B656 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Trav18A0A075B656 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav18A0A075B656 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav18A0A075B656 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav18A0A075B656 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav18A0A075B656 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav18A0A075B656 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Trav18A0A075B656 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav18A0A075B656 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.65□□□□□ -0.71
Trav18A0A075B656 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Trav18A0A075B656 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav18A0A075B656 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Trav18A0A075B656 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.64□□□□□ -0.71
Trav18A0A075B656 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.64□□□□□ -0.71
Trav18A0A075B656 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav18A0A075B656 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 1380.8 ms