Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 AL133499.1-201ENST00000596207 608 ntBASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 AL049840.4-201ENST00000602422 811 ntBASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 AP003392.6-201ENST00000607709 325 ntBASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 AC074044.1-201ENST00000609673 707 ntBASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC15.27■□□□□ 0.04
CNTNAP3Q9BZ76 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNTNAP3Q9BZ76 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CNTNAP3Q9BZ76 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.27■□□□□ 0.03
CNTNAP3Q9BZ76 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CNTNAP3Q9BZ76 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CNTNAP3Q9BZ76 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CNTNAP3Q9BZ76 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNTNAP3Q9BZ76 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNTNAP3Q9BZ76 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CNTNAP3Q9BZ76 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CNTNAP3Q9BZ76 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.27■□□□□ 0.03
CNTNAP3Q9BZ76 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CNTNAP3Q9BZ76 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.27■□□□□ 0.03
CNTNAP3Q9BZ76 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 CYP51A1P3-201ENST00000400072 1428 ntBASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 LINC00895-201ENST00000629028 1637 ntBASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 BAATP1-201ENST00000412284 1225 ntBASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 SPDYE17-201ENST00000412399 783 ntBASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 MTX1P1-201ENST00000440904 838 ntBASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 AC106760.1-201ENST00000508690 800 ntBASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 CFL1-206ENST00000527344 962 ntTSL 2 BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNTNAP3Q9BZ76 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNTNAP3Q9BZ76 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms