Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.79□□□□□ -0.36
Trim8Q99PJ2 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim8Q99PJ2 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim8Q99PJ2 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim8Q99PJ2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim8Q99PJ2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Trim8Q99PJ2 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim8Q99PJ2 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim8Q99PJ2 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim8Q99PJ2 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim8Q99PJ2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim8Q99PJ2 Gm13453-201ENSMUST00000118708 357 ntBASIC12.78□□□□□ -0.36
Trim8Q99PJ2 Gm15376-201ENSMUST00000122258 783 ntBASIC12.78□□□□□ -0.36
Trim8Q99PJ2 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trim8Q99PJ2 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim8Q99PJ2 Gm9522-201ENSMUST00000182394 926 ntBASIC12.78□□□□□ -0.36
Trim8Q99PJ2 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim8Q99PJ2 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim8Q99PJ2 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim8Q99PJ2 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim8Q99PJ2 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim8Q99PJ2 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim8Q99PJ2 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.78□□□□□ -0.36
Trim8Q99PJ2 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim8Q99PJ2 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim8Q99PJ2 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim8Q99PJ2 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim8Q99PJ2 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim8Q99PJ2 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim8Q99PJ2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim8Q99PJ2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim8Q99PJ2 Matn2-203ENSMUST00000226766 3252 ntBASIC12.77□□□□□ -0.36
Trim8Q99PJ2 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim8Q99PJ2 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.77□□□□□ -0.36
Trim8Q99PJ2 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.77□□□□□ -0.36
Trim8Q99PJ2 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim8Q99PJ2 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim8Q99PJ2 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim8Q99PJ2 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim8Q99PJ2 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim8Q99PJ2 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim8Q99PJ2 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.77□□□□□ -0.37
Trim8Q99PJ2 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim8Q99PJ2 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim8Q99PJ2 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms