Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col20a1Q923P0 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col20a1Q923P0 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col20a1Q923P0 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col20a1Q923P0 Gm22323-201ENSMUST00000103832 109 ntBASIC15.34■□□□□ 0.05
Col20a1Q923P0 Gm24255-201ENSMUST00000104481 128 ntBASIC15.34■□□□□ 0.05
Col20a1Q923P0 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC15.34■□□□□ 0.05
Col20a1Q923P0 Gm14381-201ENSMUST00000122105 414 ntBASIC15.34■□□□□ 0.05
Col20a1Q923P0 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col20a1Q923P0 Gm38092-201ENSMUST00000195600 653 ntBASIC15.34■□□□□ 0.05
Col20a1Q923P0 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.34■□□□□ 0.05
Col20a1Q923P0 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC15.34■□□□□ 0.05
Col20a1Q923P0 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col20a1Q923P0 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col20a1Q923P0 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col20a1Q923P0 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Col20a1Q923P0 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col20a1Q923P0 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col20a1Q923P0 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col20a1Q923P0 Gm6992-201ENSMUST00000217973 1607 ntBASIC15.33■□□□□ 0.05
Col20a1Q923P0 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col20a1Q923P0 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col20a1Q923P0 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col20a1Q923P0 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col20a1Q923P0 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col20a1Q923P0 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col20a1Q923P0 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col20a1Q923P0 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Col20a1Q923P0 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col20a1Q923P0 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col20a1Q923P0 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.33■□□□□ 0.04
Col20a1Q923P0 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col20a1Q923P0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col20a1Q923P0 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col20a1Q923P0 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col20a1Q923P0 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col20a1Q923P0 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC15.33■□□□□ 0.04
Col20a1Q923P0 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col20a1Q923P0 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col20a1Q923P0 Gm27243-201ENSMUST00000183964 521 ntBASIC15.33■□□□□ 0.04
Col20a1Q923P0 Gm7118-201ENSMUST00000200167 1003 ntBASIC15.33■□□□□ 0.04
Col20a1Q923P0 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col20a1Q923P0 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col20a1Q923P0 Gm24526-201ENSMUST00000082921 158 ntBASIC15.33■□□□□ 0.04
Col20a1Q923P0 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Col20a1Q923P0 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col20a1Q923P0 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col20a1Q923P0 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.33■□□□□ 0.04
Col20a1Q923P0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col20a1Q923P0 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.33■□□□□ 0.04
Col20a1Q923P0 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col20a1Q923P0 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col20a1Q923P0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col20a1Q923P0 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col20a1Q923P0 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col20a1Q923P0 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col20a1Q923P0 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.32■□□□□ 0.04
Col20a1Q923P0 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col20a1Q923P0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col20a1Q923P0 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col20a1Q923P0 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col20a1Q923P0 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col20a1Q923P0 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col20a1Q923P0 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col20a1Q923P0 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.32■□□□□ 0.04
Col20a1Q923P0 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col20a1Q923P0 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col20a1Q923P0 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Col20a1Q923P0 Gm27320-201ENSMUST00000184892 109 ntBASIC15.32■□□□□ 0.04
Col20a1Q923P0 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Col20a1Q923P0 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC15.32■□□□□ 0.04
Col20a1Q923P0 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col20a1Q923P0 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Col20a1Q923P0 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col20a1Q923P0 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col20a1Q923P0 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.32■□□□□ 0.04
Col20a1Q923P0 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col20a1Q923P0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col20a1Q923P0 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col20a1Q923P0 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col20a1Q923P0 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col20a1Q923P0 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.32■□□□□ 0.04
Col20a1Q923P0 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col20a1Q923P0 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col20a1Q923P0 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col20a1Q923P0 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col20a1Q923P0 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col20a1Q923P0 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC15.31■□□□□ 0.04
Col20a1Q923P0 Grk6-205ENSMUST00000224653 2976 ntBASIC15.31■□□□□ 0.04
Col20a1Q923P0 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC15.31■□□□□ 0.04
Col20a1Q923P0 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col20a1Q923P0 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col20a1Q923P0 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col20a1Q923P0 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col20a1Q923P0 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col20a1Q923P0 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Col20a1Q923P0 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Col20a1Q923P0 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC15.31■□□□□ 0.04
Col20a1Q923P0 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col20a1Q923P0 Gm26083-201ENSMUST00000157904 193 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms